myRT

myRT report for GCA_003363735.2_ASM336373v2

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Seq: CP031368.2 Klebsiella pneumoniae strain KpvST101_OXA-48 chromosome, complete genome (5453528 bp)
Overview 1 RT 1: 1184076-1186906 bp 2 RT 2: 1284594-1288549 bp 3 RT 3: 5232578-5238707 bp Neighborhood of RT #1 [1184076, 1186917] PRK10276 RVT-GII DinI Neighborhood of RT #2 [1284594, 1288560] PRK10598 PRK05451 RVT-GII PRK10597 Neighborhood of RT #3 [5232578, 5238707] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 1184076-1184495 bp Ori: QCS85470.1 Gene: umuD Feature: domain Description: PRK10276 Location: 1184079-1184490 bp Feature: domain Description: PRK1 0276 Location: 1 1 84079-1 1 84490 bp Feature: gene Location: 1184473-1184658 bp Feature: gene Location: 1184574-1186058 bp Ori: QCS85472.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1184976-1185666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 84976-1 1 85666 bp Feature: gene Location: 1186058-1186309 bp Feature: gene Location: 1186675-1186917 bp Ori: QCS85474.1 Feature: domain Description: DinI Location: 1186726-1186906 bp Feature: domain Description: DinI Location: 1 1 86726-1 1 86906 bp Feature: gene Location: 1284594-1285154 bp Ori: QCS85564.1 Feature: domain Description: PRK10598 Location: 1284597-1285152 bp Feature: domain Description: PRK1 0598 Location: 1 284597-1 2851 52 bp Feature: gene Location: 1285280-1286326 bp Ori: QCS85565.1 Gene: pyrC Feature: domain Description: PRK05451 Location: 1285295-1286321 bp Feature: domain Description: PRK05451 Location: 1 285295-1 286321 bp Feature: gene Location: 1286419-1287903 bp Ori: QCS85566.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1286821-1287511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 286821 -1 28751 1 bp Feature: gene Location: 1287903-1288154 bp Feature: gene Location: 1288309-1288560 bp Ori: QCS85568.1 Gene: dinI Feature: domain Description: PRK10597 Location: 1288312-1288549 bp Feature: domain Description: PRK1 0597 Location: 1 28831 2-1 288549 bp Feature: gene Location: 5232578-5233447 bp Ori: QCS88940.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 5233100-5233271 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 52331 00-5233271 bp Feature: gene Location: 5233467-5233622 bp Feature: gene Location: 5234103-5235203 bp Ori: QCS88941.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5234286-5234814 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5234286-523481 4 bp Feature: gene Location: 5235318-5237564 bp Ori: QCS88942.1 Feature: domain Description: AAA_15 Location: 5235321-5236329 bp Feature: domain Description: AAA_1 5 Location: 5235321 -5236329 bp Feature: gene Location: 5238477-5238707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183), PRK10598 (lipoprotein; Provisional), PRK05451 (dihydroorotase; Provisional), PRK10597 (DNA damage-inducible protein I; Provisional), Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: CP031372.2 Klebsiella pneumoniae strain KpvST101_OXA-48 plasmid pKpvST101_5, complete sequence (210661 bp)
Overview 1 RT 1: 143756-148294 bp Neighborhood of RT #1 [143756, 148308] cas7_csf2 RVT-GII PRK10276 Feature: gene Location: 143756-144547 bp Ori: QCS89890.1 Feature: domain Description: cas7_csf2 Location: 144077-144491 bp Feature: domain Description: cas7_csf2 Location: 144077-144491 bp Feature: gene Location: 146065-146316 bp Feature: gene Location: 146316-147800 bp Ori: QCS89826.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146718-147408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146718-147408 bp Feature: gene Location: 147716-147895 bp Feature: gene Location: 147886-148308 bp Ori: QCS89828.1 Gene: umuD Feature: domain Description: PRK10276 Location: 147892-148294 bp Feature: domain Description: PRK102 76 Location: 147892 -1482 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas7_csf2 (TIGR03115), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP031369.2 Klebsiella pneumoniae strain KpvST101_OXA-48 plasmid pKpvST101, complete sequence (292699 bp)
Overview 1 RT 1: 64050-67130 bp Neighborhood of RT #1 [64050, 67144] PRK10276 RVT-GII DUF1472 Feature: gene Location: 64050-64475 bp Ori: QCS89446.1 Gene: umuD Feature: domain Description: PRK10276 Location: 64053-64461 bp Feature: domain Description: PRK10276 Location: 64053 -64461 bp Feature: gene Location: 64630-64881 bp Feature: gene Location: 64881-66364 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65283-65652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65283 -65652 bp Feature: gene Location: 66598-66828 bp Feature: gene Location: 67052-67144 bp Feature: domain Description: DUF1472 Location: 67064-67130 bp Feature: domain Description: DUF1472 Location: 67064-6713 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DUF1472 (pfam07339)