myRT

myRT report for GCA_003411785.2_ASM341178v2

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Seq: CP039293.1 Pseudomonas aeruginosa strain PABL048 chromosome, complete genome (6879622 bp)
Overview 1 RT 1: 627084-637776 bp Neighborhood of RT #1 [627084, 637778] INT_Rci_Hp1_C RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 627084-627842 bp Feature: gene Location: 627919-629013 bp Ori: QCC63796.1 Feature: domain Description: INT_Rci_Hp1_C Location: 628429-628930 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 628429-628930 bp Feature: gene Location: 629315-631000 bp Ori: QCC63797.1 Gene: ltrA Feature: domain Description: RVT_N Location: 629372-629612 bp Feature: domain Description: RVT_N Location: 629372-62961 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 629660-630296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 629660-630296 bp Feature: domain Description: GIIM Note: maturase Location: 630350-630581 bp Feature: domain Description: GIIM Note: maturase Location: 630350-630581 bp Feature: domain Description: HNH Note: nucleases Location: 630833-630971 bp Feature: domain Description: HNH Note: nucleases Location: 630833-630971 bp Feature: gene Location: 632081-635818 bp Ori: QCC63798.1 Feature: domain Description: PBP2_BvgS_HisK_like Location: 632189-632846 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 6321 89-632846 bp Feature: domain Description: PRK09776 Location: 633059-633530 bp Feature: domain Description: PRK09776 Location: 633059-633530 bp Feature: domain Description: PAS Location: 633575-634112 bp Feature: domain Description: PAS Location: 633575-6341 1 2 bp Feature: domain Description: PRK10060 Location: 634121-635768 bp Feature: domain Description: PRK1 0060 Location: 6341 21 -635768 bp Feature: gene Location: 635925-637778 bp Ori: QCC63799.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 635937-637776 bp Feature: domain Description: PRK05658 Location: 635937-637776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)