myRT

myRT report for GCA_003428845.1_ASM342884v1

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Seq: CP031736.1 Klebsiella pneumoniae subsp. pneumoniae strain M5 plasmid pKPM502, complete sequence (250351 bp)
Overview 1 RT 1: 28847-32687 bp Neighborhood of RT #1 [28847, 32707] INT_Cre_C RVT-GII HHA Feature: gene Location: 28847-29164 bp Feature: gene Location: 29230-30366 bp Ori: AXQ45907.1 Feature: domain Description: INT_Cre_C Location: 29653-30307 bp Feature: domain Description: INT_Cre_C Location: 29653-30307 bp Feature: gene Location: 30452-31936 bp Ori: AXQ45908.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30854-31544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30854-31 544 bp Feature: gene Location: 31936-32187 bp Feature: gene Location: 32453-32707 bp Ori: AXQ45910.1 Feature: domain Description: HHA Location: 32504-32687 bp Feature: domain Description: HHA Location: 32504-32687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: CP031735.1 Klebsiella pneumoniae subsp. pneumoniae strain M5 plasmid pKPM501, complete sequence (253531 bp)
Overview 1 RT 1: 197644-201986 bp 2 RT 2: 243524-246333 bp Neighborhood of RT #1 [197644, 202042] DUF1472 RVT-GII cas7_csf2 Neighborhood of RT #2 [243524, 246347] PRK10276 RVT-GII PRK10276 Feature: gene Location: 197644-197736 bp Feature: domain Description: DUF1472 Location: 197656-197722 bp Feature: domain Description: DUF1472 Location: 197656-19772 2 bp Feature: gene Location: 197960-198190 bp Feature: gene Location: 198424-199908 bp Ori: AXQ45802.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198826-199516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19882 6-199516 bp Feature: gene Location: 199908-200159 bp Feature: gene Location: 201251-202042 bp Ori: AXQ45804.1 Feature: domain Description: cas7_csf2 Location: 201572-201986 bp Feature: domain Description: cas7_csf2 Location: 2 01572 -2 01986 bp Feature: gene Location: 243524-243949 bp Ori: AXQ45845.1 Feature: domain Description: PRK10276 Location: 243527-243935 bp Feature: domain Description: PRK102 76 Location: 2 4352 7-2 43935 bp Feature: gene Location: 244104-244355 bp Feature: gene Location: 244355-245839 bp Ori: AXQ45847.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244757-245447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 44757-2 45447 bp Feature: gene Location: 245755-245934 bp Feature: gene Location: 245925-246347 bp Ori: AXQ45849.1 Feature: domain Description: PRK10276 Location: 245931-246333 bp Feature: domain Description: PRK102 76 Location: 2 45931-2 46333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, cas7_csf2 (TIGR03115), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP031734.1 Klebsiella pneumoniae subsp. pneumoniae strain M5 chromosome, complete genome (5374875 bp)
Overview 1 RT 1: 660789-668137 bp 2 RT 2: 1916948-1919906 bp 3 RT 3: 3153626-3157725 bp Neighborhood of RT #1 [660789, 668187] FimC FimD RVT-UG4 Integrase_1 PRK09692 Neighborhood of RT #2 [1916948, 1920100] RVT-GII PRK10276 Neighborhood of RT #3 [3153626, 3157736] umuC PRK10276 RVT-GII DinI Feature: gene Location: 660789-661553 bp Ori: AXQ41169.1 Feature: domain Description: FimC Location: 660834-661536 bp Feature: domain Description: FimC Location: 66083 4-66153 6 bp Feature: gene Location: 661600-664194 bp Ori: AXQ41170.1 Feature: domain Description: FimD Location: 661642-664183 bp Feature: domain Description: FimD Location: 661642-664183 bp Feature: gene Location: 664191-666272 bp Ori: AXQ41171.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 664602-665046 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 664602-665046 bp Feature: gene Location: 666314-666769 bp Ori: AXQ41172.1 Feature: domain Description: Integrase_1 Location: 666317-666551 bp Feature: domain Description: Integrase_1 Location: 6663 17-666551 bp Feature: gene Location: 666949-668187 bp Feature: domain Description: PRK09692 Location: 666955-668137 bp Feature: domain Description: PRK09692 Location: 666955-66813 7 bp Feature: gene Location: 1916948-1917277 bp Feature: gene Location: 1917731-1917982 bp Feature: gene Location: 1917982-1919466 bp Ori: AXQ42317.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1918384-1919074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19183 84-1919074 bp Feature: gene Location: 1919544-1919783 bp Feature: gene Location: 1919783-1920100 bp Ori: AXQ42319.1 Feature: domain Description: PRK10276 Location: 1919789-1919906 bp Feature: domain Description: PRK10276 Location: 1919789-1919906 bp Feature: gene Location: 3153626-3154891 bp Ori: AXQ43456.1 Gene: umuC Feature: domain Description: umuC Location: 3153629-3154889 bp Feature: domain Description: umuC Location: 3 153 629-3 154889 bp Feature: gene Location: 3154894-3155313 bp Ori: AXQ43457.1 Feature: domain Description: PRK10276 Location: 3154897-3155308 bp Feature: domain Description: PRK10276 Location: 3 154897-3 1553 08 bp Feature: gene Location: 3155392-3156876 bp Ori: AXQ43458.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3155794-3156484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 155794-3 156484 bp Feature: gene Location: 3156876-3157127 bp Feature: gene Location: 3157494-3157736 bp Ori: AXQ43460.1 Feature: domain Description: DinI Location: 3157545-3157725 bp Feature: domain Description: DinI Location: 3 157545-3 157725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DinI (pfam06183)