myRT

myRT report for GCA_003429305.1_ASM342930v1

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Seq: CP031760.1 Pseudoalteromonas piscicida strain DE1-A chromosome 2, complete sequence (1261888 bp)
Overview 1 RT 1: 838982-843312 bp Neighborhood of RT #1 [838982, 843332] TonB_C RVT_N RVT-GII GIIM RhtB HmoA Feature: gene Location: 838982-839451 bp Feature: domain Description: TonB_C Location: 839153-839345 bp Feature: domain Description: TonB_C Location: 8391 53-839345 bp Feature: gene Location: 839522-839985 bp Feature: gene Location: 840238-841710 bp Gene: ltrA Feature: domain Description: RVT_N Location: 840286-840529 bp Feature: domain Description: RVT_N Location: 840286-840529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840574-841201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840574-841 201 bp Feature: domain Description: GIIM Note: maturase Location: 841258-841486 bp Feature: domain Description: GIIM Note: maturase Location: 841 258-841 486 bp Feature: gene Location: 842367-842999 bp Ori: AXR00330.1 Feature: domain Description: RhtB Location: 842370-842985 bp Feature: domain Description: RhtB Location: 842370-842985 bp Feature: gene Location: 843015-843332 bp Ori: AXR00331.1 Feature: domain Description: HmoA Location: 843021-843312 bp Feature: domain Description: HmoA Location: 843021 -84331 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB_C (pfam03544), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RhtB (COG1280), HmoA (COG2329)

Seq: CP031759.1 Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete sequence (4165978 bp)
Overview 1 RT 1: 3316783-3329281 bp Neighborhood of RT #1 [3316783, 3329427] TIGR00255 PLDc_N_DEXD_b1 SSL2 AE_Prim_S_like RVT-UG10 Methyltransf_25 HNH_4 YafY YafY Feature: gene Location: 3316783-3317643 bp Ori: AXQ98984.1 Feature: domain Description: TIGR00255 Location: 3316786-3317641 bp Feature: domain Description: TIGR002 55 Location: 3316786-3317641 bp Feature: gene Location: 3318102-3321301 bp Feature: domain Description: PLDc_N_DEXD_b1 Location: 3318519-3318942 bp Feature: domain Description: PLDc_N_DEXD_b1 Location: 3318519-3318942 bp Feature: domain Description: SSL2 Location: 3319038-3319956 bp Feature: domain Description: SSL2 Location: 3319038-3319956 bp Feature: gene Location: 3321311-3326635 bp Ori: AXQ98985.1 Feature: domain Description: AE_Prim_S_like Location: 3321392-3321686 bp Feature: domain Description: AE_Prim_S_like Location: 332 1392 -332 1686 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 3322646-3323306 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 332 2 646-332 3306 bp Feature: gene Location: 3326678-3328429 bp Ori: AXQ98986.1 Feature: domain Description: Methyltransf_25 Location: 3326810-3327122 bp Feature: domain Description: Methyltransf_2 5 Location: 332 6810-332 712 2 bp Feature: domain Description: HNH_4 Location: 3328094-3328217 bp Feature: domain Description: HNH_4 Location: 332 8094-332 82 17 bp Feature: gene Location: 3328594-3329427 bp Ori: AXQ98987.1 Feature: domain Description: YafY Location: 3328636-3328756 bp Feature: domain Description: YafY Location: 332 8636-332 8756 bp Feature: domain Description: YafY Location: 3328942-3329281 bp Feature: domain Description: YafY Location: 332 8942 -332 92 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR00255 (TIGR00255 family protein), PLDc_N_DEXD_b1 (cd09203), SSL2 (COG1061), AE_Prim_S_like (cl01287), RVT-UG10, Methyltransf_25 (pfam13649), HNH_4 (pfam13395), YafY (COG2378)