myRT

myRT report for GCA_003429545.1_ASM342954v1

Download annotations/find similar RTs

Seq: CP030134.1 Klebsiella pneumoniae strain 160111 plasmid pKPC2_L111, complete sequence (60307 bp)
Overview 1 RT 1: 36928-41011 bp Neighborhood of RT #1 [36928, 41148] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 36928-37359 bp Ori: AXR54391.1 Feature: domain Description: PRK10276 Location: 36979-37342 bp Feature: domain Description: PRK1 0276 Location: 36979-37342 bp Feature: gene Location: 37519-37770 bp Feature: gene Location: 37770-39254 bp Ori: AXR54393.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38172-38862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381 72-38862 bp Feature: gene Location: 39503-40474 bp Ori: AXR54394.1 Feature: domain Description: StbA Location: 39506-40451 bp Feature: domain Description: StbA Location: 39506-40451 bp Feature: gene Location: 40477-41148 bp Ori: AXR54395.1 Feature: domain Description: Plasmid_stab_B Location: 40492-40699 bp Feature: domain Description: Plasmid_stab_B Location: 40492-40699 bp Feature: domain Description: Plasmid_stab_B Location: 40804-41011 bp Feature: domain Description: Plasmid_stab_B Location: 40804-41 01 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: CP029689.1 Klebsiella pneumoniae strain 160111 chromosome, complete genome (5430212 bp)
Overview 1 RT 1: 323251-328983 bp 2 RT 2: 345240-350121 bp 3 RT 3: 800519-803295 bp 4 RT 4: 962444-966480 bp 5 RT 5: 3979375-3984237 bp 6 RT 6: 4307475-4311775 bp 7 RT 7: 4380496-4384603 bp 8 RT 8: 4529354-4533490 bp Neighborhood of RT #1 [323251, 329513] AAA_15 RVT-Retrons STKc_PknB_like Neighborhood of RT #2 [345240, 350126] YccC PRK10016 RVT-GII dacD Neighborhood of RT #3 [800519, 803295] RVT-GII Neighborhood of RT #4 [962444, 967334] DinI RVT-GII Phage_GPA Neighborhood of RT #5 [3979375, 3984263] int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #6 [4307475, 4311775] PRK05318 RVT-GII PRK10597 Neighborhood of RT #7 [4380496, 4384605] DinI RVT-GII PRK10276 umuC Neighborhood of RT #8 [4529354, 4533492] RVT-GII PRK10276 umuC Feature: gene Location: 323251-323481 bp Feature: gene Location: 324360-326636 bp Ori: AXR49131.1 Feature: domain Description: AAA_15 Location: 324393-325401 bp Feature: domain Description: AAA_15 Location: 32 4393-32 5401 bp Feature: gene Location: 326751-327851 bp Ori: AXR49132.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 326934-327462 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 6934-32 7462 bp Feature: gene Location: 328098-328340 bp Feature: gene Location: 328410-329513 bp Ori: AXR49133.1 Feature: domain Description: STKc_PknB_like Location: 328542-328983 bp Feature: domain Description: STKc_PknB_like Location: 32 8542 -32 8983 bp Feature: gene Location: 345240-346298 bp Ori: AXR49151.1 Feature: domain Description: YccC Location: 345246-346284 bp Feature: domain Description: YccC Location: 3452 46-3462 84 bp Feature: gene Location: 346397-346870 bp Ori: AXR49152.1 Feature: domain Description: PRK10016 Location: 346400-346859 bp Feature: domain Description: PRK10016 Location: 346400-346859 bp Feature: gene Location: 346952-348436 bp Ori: AXR49153.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347354-348044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347354-348044 bp Feature: gene Location: 348436-348687 bp Feature: gene Location: 348957-350126 bp Ori: AXR49155.1 Feature: domain Description: dacD Location: 348966-350121 bp Feature: domain Description: dacD Location: 348966-35012 1 bp Feature: gene Location: 800519-800776 bp Feature: gene Location: 800929-801180 bp Feature: gene Location: 801180-802664 bp Ori: AXR49534.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801582-802272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801582 -802 2 72 bp Feature: gene Location: 802761-803099 bp Feature: gene Location: 803092-803295 bp Feature: gene Location: 962444-962677 bp Ori: AXR49690.1 Feature: domain Description: DinI Location: 962489-962672 bp Feature: domain Description: DinI Location: 962 489-962 672 bp Feature: gene Location: 962689-962877 bp Feature: gene Location: 962985-964469 bp Ori: AXR49692.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963387-964077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963387-964077 bp Feature: gene Location: 964469-964720 bp Feature: gene Location: 964950-967334 bp Ori: AXR49694.1 Feature: domain Description: Phage_GPA Location: 965514-966480 bp Feature: domain Description: Phage_GPA Location: 965514-966480 bp Feature: gene Location: 3979375-3980427 bp Ori: AXR52449.1 Feature: domain Description: int Location: 3979378-3980377 bp Feature: domain Description: int Location: 3979378-3980377 bp Feature: gene Location: 3980595-3980846 bp Feature: gene Location: 3980846-3982330 bp Ori: AXR52451.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3981248-3981938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39812 48-3981938 bp Feature: gene Location: 3982429-3983373 bp Feature: gene Location: 3983385-3984263 bp Ori: AXR52453.1 Feature: domain Description: Phage_CI_repr Location: 3983412-3983595 bp Feature: domain Description: Phage_CI_repr Location: 3983412 -3983595 bp Feature: domain Description: Phage_CI_repr Location: 3983724-3983916 bp Feature: domain Description: Phage_CI_repr Location: 398372 4-3983916 bp Feature: domain Description: Phage_CI_C Location: 3983943-3984237 bp Feature: domain Description: Phage_CI_C Location: 3983943-39842 37 bp Feature: gene Location: 4307475-4308836 bp Ori: AXR52750.1 Feature: domain Description: PRK05318 Location: 4307499-4308798 bp Feature: domain Description: PRK05318 Location: 4307499-4308798 bp Feature: gene Location: 4309426-4309677 bp Feature: gene Location: 4309677-4311161 bp Ori: AXR52752.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4310079-4310769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4310079-4310769 bp Feature: gene Location: 4311240-4311473 bp Ori: AXR52753.1 Feature: domain Description: PRK10597 Location: 4311243-4311468 bp Feature: domain Description: PRK10597 Location: 43112 43-4311468 bp Feature: gene Location: 4311485-4311775 bp Feature: gene Location: 4380496-4380738 bp Ori: AXR52821.1 Feature: domain Description: DinI Location: 4380547-4380727 bp Feature: domain Description: DinI Location: 4380547-438072 7 bp Feature: gene Location: 4381105-4381356 bp Feature: gene Location: 4381356-4382840 bp Ori: AXR52823.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4381758-4382448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4381758-4382 448 bp Feature: gene Location: 4382918-4383337 bp Ori: AXR52824.1 Feature: domain Description: PRK10276 Location: 4382921-4383332 bp Feature: domain Description: PRK102 76 Location: 4382 92 1-4383332 bp Feature: gene Location: 4383340-4384605 bp Ori: AXR52825.1 Feature: domain Description: umuC Location: 4383343-4384603 bp Feature: domain Description: umuC Location: 4383343-4384603 bp Feature: gene Location: 4529354-4529443 bp Feature: gene Location: 4529991-4530242 bp Feature: gene Location: 4530242-4531726 bp Ori: AXR52972.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4530644-4531334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4530644-4531334 bp Feature: gene Location: 4531806-4532225 bp Ori: AXR52973.1 Feature: domain Description: PRK10276 Location: 4531809-4532220 bp Feature: domain Description: PRK102 76 Location: 4531809-4532 2 2 0 bp Feature: gene Location: 4532227-4533492 bp Ori: AXR52974.1 Feature: domain Description: umuC Location: 4532230-4533490 bp Feature: domain Description: umuC Location: 4532 2 30-4533490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), DinI (pfam06183), Phage_GPA (pfam05840), int (PHA02601)
Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), PRK10597 (DNA damage-inducible protein I; Provisional), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP030135.1 Klebsiella pneumoniae strain 160111 plasmid pOXA48_L111, complete sequence (65500 bp)
Overview 1 RT 1: 46296-49620 bp Neighborhood of RT #1 [46296, 49643] YdiL PRK09812 RVT-GII PRK10276 Feature: gene Location: 46296-46523 bp Feature: domain Description: YdiL Location: 46302-46491 bp Feature: domain Description: YdiL Location: 463 02-46491 bp Feature: gene Location: 46742-47206 bp Ori: AXR54474.1 Feature: domain Description: PRK09812 Location: 46865-47201 bp Feature: domain Description: PRK09812 Location: 46865-47201 bp Feature: gene Location: 47323-48807 bp Ori: AXR54475.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47725-48415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47725-48415 bp Feature: gene Location: 48807-49058 bp Feature: gene Location: 49209-49643 bp Ori: AXR54477.1 Feature: domain Description: PRK10276 Location: 49257-49620 bp Feature: domain Description: PRK10276 Location: 49257-49620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdiL (COG1266), PRK09812 (type II toxin-antitoxin system ChpB family toxin), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP030132.1 Klebsiella pneumoniae strain 160111 plasmid pIncAC2_L111, complete sequence (194181 bp)
Overview 1 RT 1: 52068-57700 bp Neighborhood of RT #1 [52068, 57700] COG4644 DDE_Tnp_Tn3 Zn_Tnp_IS91 RVT-GII Feature: gene Location: 52068-55073 bp Ori: AXR54146.1 Feature: domain Description: COG4644 Location: 52137-52413 bp Feature: domain Description: COG4 64 4 Location: 52137-524 13 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 53826-54993 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 53826-54 993 bp Feature: gene Location: 55107-55355 bp Feature: domain Description: Zn_Tnp_IS91 Location: 55206-55353 bp Feature: domain Description: Zn_Tnp_IS91 Location: 55206-55353 bp Feature: gene Location: 55432-56916 bp Ori: AXR54147.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55834-56524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55834 -56524 bp Feature: gene Location: 56916-57167 bp Feature: gene Location: 57476-57700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4644 (Transposase and inactivated derivatives, TnpA family ), DDE_Tnp_Tn3 (pfam01526), Zn_Tnp_IS91 (pfam14319), RVT-GII