myRT

myRT report for GCA_003429625.1_ASM342962v1

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Seq: CP018307.1 Klebsiella variicola strain X39 chromosome, complete genome (5641443 bp)
Overview 1 RT 1: 87430-90684 bp 2 RT 2: 2060109-2064970 bp 3 RT 3: 2143272-2146937 bp Neighborhood of RT #1 [87430, 90761] RVT-GII PRK10276 Terminase_2 Neighborhood of RT #2 [2060109, 2064972] GATase1_ScBLP_like BPL_N RVT-GII PRK10276 umuC Neighborhood of RT #3 [2143272, 2146937] PRK10597 RVT-GII Feature: gene Location: 87430-87768 bp Feature: gene Location: 87940-88191 bp Feature: gene Location: 88191-89675 bp Ori: AXO68690.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88593-89283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88593-89283 bp Feature: gene Location: 89754-90083 bp Ori: AXO73681.1 Feature: domain Description: PRK10276 Location: 89760-89913 bp Feature: domain Description: PRK1 0276 Location: 89760-8991 3 bp Feature: gene Location: 90141-90761 bp Ori: AXO68691.1 Feature: domain Description: Terminase_2 Location: 90186-90684 bp Feature: domain Description: Terminase_2 Location: 901 86-90684 bp Feature: gene Location: 2060109-2060885 bp Ori: AXO70426.1 Feature: domain Description: GATase1_ScBLP_like Location: 2060229-2060670 bp Feature: domain Description: GATase1 _ScBLP_like Location: 2060229-2060670 bp Feature: domain Description: BPL_N Location: 2060721-2060826 bp Feature: domain Description: BPL_N Location: 2060721 -2060826 bp Feature: gene Location: 2061477-2061728 bp Feature: gene Location: 2061728-2063212 bp Ori: AXO70428.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2062130-2062820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20621 30-2062820 bp Feature: gene Location: 2063288-2063707 bp Ori: AXO70429.1 Feature: domain Description: PRK10276 Location: 2063291-2063702 bp Feature: domain Description: PRK1 0276 Location: 2063291 -2063702 bp Feature: gene Location: 2063710-2064972 bp Ori: AXO70430.1 Feature: domain Description: umuC Location: 2063713-2064970 bp Feature: domain Description: umuC Location: 206371 3-2064970 bp Feature: gene Location: 2143272-2143562 bp Feature: gene Location: 2143574-2143807 bp Ori: AXO70509.1 Feature: domain Description: PRK10597 Location: 2143577-2143802 bp Feature: domain Description: PRK1 0597 Location: 21 43577-21 43802 bp Feature: gene Location: 2143886-2145370 bp Ori: AXO70510.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2144288-2144978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 44288-21 44978 bp Feature: gene Location: 2145370-2145621 bp Feature: gene Location: 2146734-2146937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Terminase_2 (pfam03592), GATase1_ScBLP_like (cd03144), BPL_N (pfam09825), umuC (PRK03609), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: CP023978.1 Klebsiella variicola strain X39 plasmid pX39-1, complete sequence (213341 bp)
Overview 1 RT 1: 44416-48491 bp Neighborhood of RT #1 [44416, 48508] umuC PRK10276 RVT-GII PRK10276 Feature: gene Location: 44416-45681 bp Ori: AXO73947.1 Feature: domain Description: umuC Location: 44419-45670 bp Feature: domain Description: umuC Location: 44419-45670 bp Feature: gene Location: 45681-46106 bp Ori: AXO73948.1 Feature: domain Description: PRK10276 Location: 45732-46092 bp Feature: domain Description: PRK102 76 Location: 45732 -46092 bp Feature: gene Location: 46184-47667 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46586-47276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46586-472 76 bp Feature: gene Location: 47667-47918 bp Feature: gene Location: 48077-48508 bp Ori: AXO73950.1 Feature: domain Description: PRK10276 Location: 48128-48491 bp Feature: domain Description: PRK102 76 Location: 4812 8-48491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII