myRT

myRT report for GCA_003432165.1_ASM343216v1

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Seq: CP031801.1 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence (161308 bp)
Overview 1 RT 1: 150659-155723 bp Neighborhood of RT #1 [150659, 155737] DUF4209 RVT-GII PRK10276 Feature: gene Location: 150659-152446 bp Ori: AXS22441.1 Feature: domain Description: DUF4209 Location: 152111-152381 bp Feature: domain Description: DUF4209 Location: 1 521 1 1 -1 52381 bp Feature: gene Location: 152959-153189 bp Feature: gene Location: 153423-154907 bp Ori: AXS22442.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153825-154515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 53825-1 5451 5 bp Feature: gene Location: 154907-155158 bp Feature: gene Location: 155312-155737 bp Ori: AXS22444.1 Feature: domain Description: PRK10276 Location: 155315-155723 bp Feature: domain Description: PRK1 0276 Location: 1 5531 5-1 55723 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4209 (pfam13910), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP031800.1 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 chromosome, complete genome (5509899 bp)
Overview 1 RT 1: 2278484-2281105 bp Neighborhood of RT #1 [2278484, 2281105] RVT-Retrons HTH_XRE Feature: gene Location: 2278484-2278753 bp Feature: gene Location: 2278977-2279414 bp Feature: gene Location: 2279539-2280489 bp Ori: AXS19141.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2279719-2280262 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 79719-2 2 802 62 bp Feature: gene Location: 2280467-2280775 bp Ori: AXS19142.1 Feature: domain Description: HTH_XRE Location: 2280479-2280644 bp Feature: domain Description: HTH_XRE Location: 2 2 80479-2 2 80644 bp Feature: gene Location: 2280812-2281105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530)

Seq: CP031805.1 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed5, complete sequence (65454 bp)
Overview 1 RT 1: 13857-17181 bp Neighborhood of RT #1 [13857, 17204] YdiL PRK09812 RVT-GII PRK10276 Feature: gene Location: 13857-14084 bp Feature: domain Description: YdiL Location: 13863-14052 bp Feature: domain Description: YdiL Location: 13 863 -14052 bp Feature: gene Location: 14303-14767 bp Ori: AXS22836.1 Feature: domain Description: PRK09812 Location: 14426-14762 bp Feature: domain Description: PRK09812 Location: 14426-14762 bp Feature: gene Location: 14884-16368 bp Ori: AXS22837.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15286-15976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15286-15976 bp Feature: gene Location: 16368-16619 bp Feature: gene Location: 16770-17204 bp Ori: AXS22839.1 Feature: domain Description: PRK10276 Location: 16818-17181 bp Feature: domain Description: PRK10276 Location: 16818-17181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdiL (COG1266), PRK09812 (type II toxin-antitoxin system ChpB family toxin), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)