myRT

myRT report for GCA_003432325.1_ASM343232v1

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Seq: CP031837.1 Clostridium sporogenes strain YH-Raf3-2-5 chromosome, complete genome (2845495 bp)
Overview 1 RT 1: 518216-522318 bp 2 RT 2: 1480549-1486214 bp Neighborhood of RT #1 [518216, 522318] HTH_XRE RVT-GII GIIM DUF961 Neighborhood of RT #2 [1480549, 1486219] PucR CdaR RVT-GII GIIM COG3464 Feature: gene Location: 518216-518623 bp Feature: domain Description: HTH_XRE Location: 518228-518399 bp Feature: domain Description: HTH_XRE Location: 51 8228-51 8399 bp Feature: gene Location: 518637-518969 bp Feature: gene Location: 519794-521083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520085-520718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520085-52071 8 bp Feature: domain Description: GIIM Note: maturase Location: 520802-521024 bp Feature: domain Description: GIIM Note: maturase Location: 520802-521 024 bp Feature: gene Location: 521374-521745 bp Feature: domain Description: DUF961 Location: 521389-521689 bp Feature: domain Description: DUF961 Location: 521 389-521 689 bp Feature: gene Location: 521824-522318 bp Feature: gene Location: 1480549-1480707 bp Feature: gene Location: 1480844-1482490 bp Feature: domain Description: PucR Location: 1480889-1481231 bp Feature: domain Description: PucR Location: 1 480889-1 481 231 bp Feature: domain Description: CdaR Location: 1481663-1482449 bp Feature: domain Description: CdaR Location: 1 481 663-1 482449 bp Feature: gene Location: 1482853-1484097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1483018-1483633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 48301 8-1 483633 bp Feature: domain Description: GIIM Note: maturase Location: 1483693-1483924 bp Feature: domain Description: GIIM Note: maturase Location: 1 483693-1 483924 bp Feature: gene Location: 1484885-1485307 bp Feature: gene Location: 1485377-1486219 bp Feature: domain Description: COG3464 Location: 1485455-1486214 bp Feature: domain Description: COG3464 Location: 1 485455-1 48621 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), DUF961 (pfam06125), PucR (pfam07905), CdaR (COG3835), COG3464 (Transposase )