myRT

myRT report for GCA_003443655.1_ASM344365v1

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Seq: CP031941.1 Nostoc sphaeroides strain Kutzing En chromosome, complete genome (6531820 bp)
Overview 1 RT 1: 1706795-1714525 bp 2 RT 2: 3750054-3755985 bp 3 RT 3: 5418289-5424571 bp Neighborhood of RT #1 [1706795, 1714525] YobN Amino_oxidase RVT_N RVT-GII GIIM HNHc MMR_HSR1 COG3597 Neighborhood of RT #2 [3750054, 3755996] Aes NERD PhoH HelD RVT-UG19 AroE Neighborhood of RT #3 [5418289, 5424573] FolB PRK07449 RVT-UG12 DUF2887 DUF4351 PRK07396 Feature: gene Location: 1706795-1708357 bp Feature: gene Location: 1708441-1709481 bp Feature: domain Description: YobN Location: 1708564-1708810 bp Feature: domain Description: YobN Location: 1 708564-1 70881 0 bp Feature: domain Description: Amino_oxidase Location: 1708894-1709476 bp Feature: domain Description: Amino_oxidase Location: 1 708894-1 709476 bp Feature: gene Location: 1710756-1712678 bp Feature: domain Description: RVT_N Location: 1710840-1711086 bp Feature: domain Description: RVT_N Location: 1 71 0840-1 71 1 086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1711128-1711815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 1 1 28-1 71 1 81 5 bp Feature: domain Description: GIIM Note: maturase Location: 1711920-1712130 bp Feature: domain Description: GIIM Note: maturase Location: 1 71 1 920-1 71 21 30 bp Feature: domain Description: HNHc Note: nucleases Location: 1712352-1712502 bp Feature: domain Description: HNHc Note: nucleases Location: 1 71 2352-1 71 2502 bp Feature: gene Location: 1712880-1714199 bp Feature: domain Description: MMR_HSR1 Location: 1713129-1713486 bp Feature: domain Description: MMR_HSR1 Location: 1 71 31 29-1 71 3486 bp Feature: domain Description: COG3597 Location: 1713789-1714185 bp Feature: domain Description: COG3597 Location: 1 71 3789-1 71 41 85 bp Feature: gene Location: 1714322-1714525 bp Feature: gene Location: 3750054-3751274 bp Feature: domain Description: Aes Location: 3750504-3751260 bp Feature: domain Description: Aes Location: 3750504-3751 260 bp Feature: gene Location: 3751538-3753100 bp Feature: domain Description: NERD Location: 3751586-3751865 bp Feature: domain Description: NERD Location: 3751 586-3751 865 bp Feature: domain Description: PhoH Location: 3752162-3752321 bp Feature: domain Description: PhoH Location: 37521 62-3752321 bp Feature: domain Description: HelD Location: 3752417-3753071 bp Feature: domain Description: HelD Location: 375241 7-3753071 bp Feature: gene Location: 3753111-3754826 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 3753504-3753996 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 3753504-3753996 bp Feature: gene Location: 3754831-3754977 bp Feature: gene Location: 3755091-3755996 bp Feature: domain Description: AroE Location: 3755109-3755985 bp Feature: domain Description: AroE Location: 37551 09-3755985 bp Feature: gene Location: 5418289-5418657 bp Feature: domain Description: FolB Location: 5418292-5418646 bp Feature: domain Description: FolB Location: 541 8292-541 8646 bp Feature: gene Location: 5418833-5420611 bp Feature: domain Description: PRK07449 Location: 5418860-5420594 bp Feature: domain Description: PRK07449 Location: 541 8860-5420594 bp Feature: gene Location: 5420821-5422506 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 5421247-5421691 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 5421 247-5421 691 bp Feature: gene Location: 5422775-5423599 bp Feature: domain Description: DUF2887 Location: 5422784-5423372 bp Feature: domain Description: DUF2887 Location: 5422784-5423372 bp Feature: domain Description: DUF4351 Location: 5423405-5423579 bp Feature: domain Description: DUF4351 Location: 5423405-5423579 bp Feature: gene Location: 5423740-5424573 bp Feature: domain Description: PRK07396 Location: 5423746-5424571 bp Feature: domain Description: PRK07396 Location: 5423746-5424571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YobN (COG1231), Amino_oxidase (pfam01593), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), MMR_HSR1 (pfam01926), COG3597 (Uncharacterized conserved protein, DUF697 family ), Aes (COG0657), NERD (pfam08378)
PhoH (pfam02562), HelD (COG3973), RVT-UG19, AroE (COG0169), FolB (smart00905), PRK07449 (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated), RVT-UG12, DUF2887 (pfam11103), DUF4351 (pfam14261), PRK07396 (dihydroxynaphthoic acid synthetase; Validated)