myRT

myRT report for GCA_003454755.1_ASM345475v1

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Seq: CP032052.1 Streptomyces clavuligerus strain F1D-5 chromosome, complete genome (6900908 bp)
Overview 1 RT 1: 3666989-3674374 bp 2 RT 2: 5013581-5019221 bp 3 RT 3: 6329921-6333319 bp Neighborhood of RT #1 [3666989, 3674766] AbiEii AbiEii RVT-UNC PRK09694 Cas3_C CRISPR_Cse1 Neighborhood of RT #2 [5013581, 5019221] HTH_XRE Sa_NUDIX RVT-UG23 APH APH Neighborhood of RT #3 [6329921, 6333319] RVT-GII GIIM DDE_3 Feature: gene Location: 3666989-3667417 bp Feature: gene Location: 3667404-3668417 bp Ori: AXU14004.1 Feature: domain Description: AbiEii Location: 3667494-3667596 bp Feature: domain Description: AbiEii Location: 3667494-3667596 bp Feature: domain Description: AbiEii Location: 3667923-3668157 bp Feature: domain Description: AbiEii Location: 3667923-36681 57 bp Feature: gene Location: 3668446-3669717 bp Ori: AXU14005.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 3668716-3669163 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 366871 6-36691 63 bp Feature: gene Location: 3669791-3672841 bp Ori: AXU14006.1 Feature: domain Description: PRK09694 Location: 3669842-3671930 bp Feature: domain Description: PRK09694 Location: 3669842-3671 930 bp Feature: domain Description: Cas3_C Location: 3672323-3672629 bp Feature: domain Description: Cas3_C Location: 3672323-3672629 bp Feature: gene Location: 3672832-3674766 bp Ori: AXU14007.1 Gene: casA Feature: domain Description: CRISPR_Cse1 Location: 3672838-3674374 bp Feature: domain Description: CRISPR_Cse1 Location: 3672838-3674374 bp Feature: gene Location: 5013581-5014480 bp Ori: AXU15006.1 Feature: domain Description: HTH_XRE Location: 5013680-5013839 bp Feature: domain Description: HTH_XRE Location: 501 3680-501 3839 bp Feature: gene Location: 5014800-5015507 bp Ori: AXU15007.1 Feature: domain Description: Sa_NUDIX Location: 5014914-5015505 bp Feature: domain Description: Sa_NUDIX Location: 501 491 4-501 5505 bp Feature: gene Location: 5015603-5017048 bp Ori: AXU15008.1 Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 5015768-5016362 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 501 5768-501 6362 bp Feature: gene Location: 5017891-5018688 bp Ori: AXU15009.1 Feature: domain Description: APH Location: 5018026-5018332 bp Feature: domain Description: APH Location: 501 8026-501 8332 bp Feature: domain Description: APH Location: 5018368-5018566 bp Feature: domain Description: APH Location: 501 8368-501 8566 bp Feature: gene Location: 5019024-5019221 bp Feature: gene Location: 6329921-6330298 bp Feature: gene Location: 6330542-6330832 bp Feature: gene Location: 6330874-6332304 bp Ori: AXU15999.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6331195-6331879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6331 1 95-6331 879 bp Feature: domain Description: GIIM Note: maturase Location: 6331948-6332182 bp Feature: domain Description: GIIM Note: maturase Location: 6331 948-63321 82 bp Feature: gene Location: 6332321-6332530 bp Feature: domain Description: DDE_3 Location: 6332438-6332531 bp Feature: domain Description: DDE_3 Location: 6332438-6332531 bp Feature: gene Location: 6332603-6333319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), RVT-UNC/RVT-UG23/RVT-GII/RVT-CRISPR(RVT-UNC), PRK09694 (CRISPR-associated helicase/endonuclease Cas3), Cas3_C (pfam18395), CRISPR_Cse1 (pfam09481), HTH_XRE (smart00530), Sa_NUDIX (pfam18167), RVT-UG23, APH (pfam01636), RVT-GII
GIIM (pfam08388), DDE_3 (pfam13358)