myRT

myRT report for GCA_003456975.1_ASM345697v1

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Seq: CP020378.1 Clostridioides difficile strain DSM 102859 chromosome, complete genome (4247015 bp)
Overview 1 RT 1: 1700163-1707920 bp 2 RT 2: 2173197-2177627 bp Neighborhood of RT #1 [1700163, 1707952] MtMvhB_like CW_binding_2 CW_binding_2 CW_binding_2 RVT-GII HNHc AmpC Neighborhood of RT #2 [2173197, 2177653] Lysozyme_like RVT-GII TpcC AcrR Feature: gene Location: 1700163-1701404 bp Ori: AXU27494.1 Feature: domain Description: MtMvhB_like Location: 1700877-1701162 bp Feature: domain Description: MtMvhB_like Location: 1 700877-1 701 1 62 bp Feature: gene Location: 1701565-1703583 bp Ori: AXU27495.1 Feature: domain Description: CW_binding_2 Location: 1702699-1702951 bp Feature: domain Description: CW_binding_2 Location: 1 702699-1 702951 bp Feature: domain Description: CW_binding_2 Location: 1702993-1703263 bp Feature: domain Description: CW_binding_2 Location: 1 702993-1 703263 bp Feature: domain Description: CW_binding_2 Location: 1703287-1703545 bp Feature: domain Description: CW_binding_2 Location: 1 703287-1 703545 bp Feature: gene Location: 1703679-1705520 bp Ori: AXU27496.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1704024-1704723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 704024-1 704723 bp Feature: domain Description: HNHc Note: nucleases Location: 1705278-1705410 bp Feature: domain Description: HNHc Note: nucleases Location: 1 705278-1 70541 0 bp Feature: gene Location: 1705962-1706207 bp Feature: gene Location: 1706906-1707952 bp Ori: AXU27498.1 Feature: domain Description: AmpC Location: 1706951-1707920 bp Feature: domain Description: AmpC Location: 1 706951 -1 707920 bp Feature: gene Location: 2173197-2173802 bp Ori: AXU27916.1 Feature: domain Description: Lysozyme_like Location: 2173344-2173788 bp Feature: domain Description: Lysozyme_like Location: 21 73344-21 73788 bp Feature: gene Location: 2174503-2175243 bp Ori: AXU27917.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2174812-2175235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 7481 2-21 75235 bp Feature: gene Location: 2175995-2176897 bp Ori: AXU27918.1 Feature: domain Description: TpcC Location: 2176220-2176889 bp Feature: domain Description: TpcC Location: 21 76220-21 76889 bp Feature: gene Location: 2177042-2177653 bp Ori: AXU27919.1 Feature: domain Description: AcrR Location: 2177072-2177627 bp Feature: domain Description: AcrR Location: 21 77072-21 77627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MtMvhB_like (cd10549), CW_binding_2 (pfam04122), RVT-GII, HNHc (smart00507), AmpC (COG1680), Lysozyme_like (pfam13702), TpcC (pfam12642), AcrR (COG1309)