myRT

myRT report for GCA_003482165.1_ASM348216v1

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Seq: CP012325.1 Clostridioides difficile strain DSM 29020 chromosome, complete genome (4139418 bp)
Overview 1 RT 1: 2046559-2056184 bp Neighborhood of RT #1 [2046559, 2056243] TraC-F-type RVT-GII HNHc 3D_containing_proteins NlpD Spr DUF4315 Feature: gene Location: 2046559-2047374 bp Feature: gene Location: 2047749-2049986 bp Ori: AXU68273.1 Feature: domain Description: TraC-F-type Location: 2048673-2049975 bp Feature: domain Description: TraC-F-type Location: 2048673-2049975 bp Feature: gene Location: 2050719-2052602 bp Ori: AXU68274.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2051055-2051772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2051 055-2051 772 bp Feature: domain Description: HNHc Note: nucleases Location: 2052354-2052492 bp Feature: domain Description: HNHc Note: nucleases Location: 2052354-2052492 bp Feature: gene Location: 2053105-2055885 bp Ori: AXU68275.1 Gene: spr Feature: domain Description: 3D_containing_proteins Location: 2054647-2054908 bp Feature: domain Description: 3D_containing_proteins Location: 2054647-2054908 bp Feature: domain Description: NlpD Location: 2055052-2055484 bp Feature: domain Description: NlpD Location: 2055052-2055484 bp Feature: domain Description: Spr Location: 2055514-2055868 bp Feature: domain Description: Spr Location: 205551 4-2055868 bp Feature: gene Location: 2055923-2056243 bp Ori: AXU68276.1 Feature: domain Description: DUF4315 Location: 2055935-2056184 bp Feature: domain Description: DUF431 5 Location: 2055935-20561 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507), 3D_containing_proteins (cd14667), NlpD (COG0739), Spr (COG0791), DUF4315 (pfam14193)