myRT

myRT report for GCA_003482345.1_ASM348234v1

Download annotations/find similar RTs

Seq: CP019857.1 Clostridioides difficile strain DSM 29745 chromosome, complete genome (4240646 bp)
Overview 1 RT 1: 2017916-2024661 bp Neighborhood of RT #1 [2017916, 2024669] TrbL Lysozyme_like RVT-GII KOG4768 HNHc Lysozyme_like Spr TpcC Feature: gene Location: 2017916-2020087 bp Ori: AXU86751.1 Feature: domain Description: TrbL Location: 2018825-2019182 bp Feature: domain Description: TrbL Location: 201 8825-201 91 82 bp Feature: gene Location: 2020084-2020515 bp Ori: AXU86752.1 Feature: domain Description: Lysozyme_like Location: 2020231-2020498 bp Feature: domain Description: Lysozyme_like Location: 2020231 -2020498 bp Feature: gene Location: 2021283-2023058 bp Ori: AXU86753.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2021541-2022252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2021 541 -2022252 bp Feature: domain Description: KOG4768 Location: 2022336-2022450 bp Feature: domain Description: KOG4768 Location: 2022336-2022450 bp Feature: domain Description: HNHc Note: nucleases Location: 2022801-2022918 bp Feature: domain Description: HNHc Note: nucleases Location: 2022801 -202291 8 bp Feature: gene Location: 2023259-2023750 bp Ori: AXU86754.1 Feature: domain Description: Lysozyme_like Location: 2023265-2023352 bp Feature: domain Description: Lysozyme_like Location: 2023265-2023352 bp Feature: domain Description: Spr Location: 2023376-2023733 bp Feature: domain Description: Spr Location: 2023376-2023733 bp Feature: gene Location: 2023767-2024669 bp Ori: AXU86755.1 Feature: domain Description: TpcC Location: 2023992-2024661 bp Feature: domain Description: TpcC Location: 2023992-2024661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL (pfam04610), Lysozyme_like (pfam13702), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), HNHc (smart00507), Spr (COG0791), TpcC (pfam12642)