myRT

myRT report for GCA_003482365.1_ASM348236v1

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Seq: CP019864.1 Clostridioides difficile strain DSM 29747 chromosome, complete genome (4071596 bp)
Overview 1 RT 1: 2026615-2035484 bp Neighborhood of RT #1 [2026615, 2036185] COG5545 TraG-D_C RVT-GII HNHc MFS Relaxase Feature: gene Location: 2026615-2027964 bp Ori: AXU90434.1 Feature: domain Description: COG5545 Location: 2026663-2027674 bp Feature: domain Description: COG5545 Location: 2026663-2027674 bp Feature: gene Location: 2028538-2029254 bp Ori: AXU90435.1 Feature: domain Description: TraG-D_C Location: 2028685-2029039 bp Feature: domain Description: TraG-D_C Location: 2028685-2029039 bp Feature: gene Location: 2030353-2032233 bp Ori: AXU90436.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2030680-2031418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2030680-2031 41 8 bp Feature: domain Description: HNHc Note: nucleases Location: 2031964-2032117 bp Feature: domain Description: HNHc Note: nucleases Location: 2031 964-20321 1 7 bp Feature: gene Location: 2032549-2033769 bp Ori: AXU90437.1 Feature: domain Description: MFS Location: 2032591-2033740 bp Feature: domain Description: MFS Location: 2032591 -2033740 bp Feature: gene Location: 2034560-2036185 bp Ori: AXU90438.1 Feature: domain Description: Relaxase Location: 2034713-2035484 bp Feature: domain Description: Relaxase Location: 203471 3-2035484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5545 (Predicted P-loop ATPase and inactivated derivatives ), TraG-D_C (pfam12696), RVT-GII, HNHc (smart00507), MFS (cl28910), Relaxase (pfam03432)