myRT

myRT report for GCA_003491165.1_ASM349116v1

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Seq: CP023062.1 Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence (77306 bp)
Overview 1 RT 1: 7607-10164 bp 2 RT 2: 41788-45718 bp 3 RT 3: 71363-73964 bp Neighborhood of RT #1 [7607, 10164] RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [41788, 45783] umuC PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [71363, 73964] COG3436 RVT-GII GIIM Feature: gene Location: 7607-7801 bp Feature: gene Location: 7696-7920 bp Feature: gene Location: 8035-9702 bp Ori: AXV27871.1 Feature: domain Description: RVT_N Location: 8083-8320 bp Feature: domain Description: RVT_N Location: 8083-8320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8371-9013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8371 -901 3 bp Feature: domain Description: GIIM Note: maturase Location: 9064-9298 bp Feature: domain Description: GIIM Note: maturase Location: 9064-9298 bp Feature: domain Description: HNHc Note: nucleases Location: 9508-9667 bp Feature: domain Description: HNHc Note: nucleases Location: 9508-9667 bp Feature: gene Location: 9739-9855 bp Feature: gene Location: 9973-10164 bp Feature: gene Location: 41788-42642 bp Ori: AXV27939.1 Feature: domain Description: umuC Location: 41842-42640 bp Feature: domain Description: umuC Location: 41 842-42640 bp Feature: gene Location: 42626-43072 bp Ori: AXV27940.1 Feature: domain Description: PHA02517 Location: 42629-43070 bp Feature: domain Description: PHA0251 7 Location: 42629-43070 bp Feature: gene Location: 43189-44697 bp Ori: AXV27941.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43447-44179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43447-441 79 bp Feature: domain Description: GIIM Note: maturase Location: 44254-44452 bp Feature: domain Description: GIIM Note: maturase Location: 44254-44452 bp Feature: gene Location: 44736-44858 bp Feature: gene Location: 45304-45783 bp Ori: AXV27943.1 Feature: domain Description: PHA02517 Location: 45364-45718 bp Feature: domain Description: PHA0251 7 Location: 45364-4571 8 bp Feature: gene Location: 71363-71968 bp Ori: AXV27995.1 Feature: domain Description: COG3436 Location: 71489-71945 bp Feature: domain Description: COG3436 Location: 71 489-71 945 bp Feature: gene Location: 72020-72412 bp Feature: gene Location: 72427-73134 bp Ori: AXV27997.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72430-72793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72430-72793 bp Feature: domain Description: GIIM Note: maturase Location: 72841-73072 bp Feature: domain Description: GIIM Note: maturase Location: 72841 -73072 bp Feature: gene Location: 73411-73626 bp Feature: gene Location: 73800-73964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), umuC (PRK03609), PHA02517 (putative transposase OrfB; Reviewed), COG3436 (Transposase )

Seq: CP023061.1 Escherichia coli strain FORC_069 chromosome, complete genome (5189917 bp)
Overview 1 RT 1: 878613-884042 bp 2 RT 2: 1248156-1252458 bp 3 RT 3: 4472487-4475842 bp 4 RT 4: 4667533-4673563 bp 5 RT 5: 4682261-4686873 bp 6 RT 6: 4689790-4697503 bp Neighborhood of RT #1 [878613, 884053] COG3547 PHA02517 RVT-GII GIIM PHA02517 HTH_38 Tra8 Neighborhood of RT #2 [1248156, 1252460] PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #3 [4472487, 4475842] RVT-GII GIIM PHA02517 Neighborhood of RT #4 [4667533, 4673565] InsE PHA02517 RVT-GII GIIM PHA02517 TonB-siderophor Neighborhood of RT #5 [4682261, 4686875] COG3547 PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #6 [4689790, 4697505] Peptidase_S6 autotrans_barl PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 878613-879689 bp Ori: AXV23484.1 Feature: domain Description: COG3547 Location: 878652-879573 bp Feature: domain Description: COG3547 Location: 878652 -879573 bp Feature: gene Location: 879908-880036 bp Ori: AXV23485.1 Feature: domain Description: PHA02517 Location: 879911-880001 bp Feature: domain Description: PHA02 517 Location: 879911-880001 bp Feature: gene Location: 880231-881754 bp Ori: AXV23486.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880504-881236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880504-8812 36 bp Feature: domain Description: GIIM Note: maturase Location: 881311-881509 bp Feature: domain Description: GIIM Note: maturase Location: 881311-881509 bp Feature: gene Location: 882346-882585 bp Ori: AXV23487.1 Feature: domain Description: PHA02517 Location: 882349-882520 bp Feature: domain Description: PHA02 517 Location: 882 349-882 52 0 bp Feature: gene Location: 882902-884053 bp Ori: AXV23488.1 Feature: domain Description: HTH_38 Location: 882911-883025 bp Feature: domain Description: HTH_38 Location: 882 911-88302 5 bp Feature: domain Description: Tra8 Location: 883061-884042 bp Feature: domain Description: Tra8 Location: 883061-884042 bp Feature: gene Location: 1248156-1249025 bp Feature: gene Location: 1249028-1249399 bp Ori: AXV23865.1 Feature: domain Description: PHA02517 Location: 1249031-1249397 bp Feature: domain Description: PHA02 517 Location: 12 49031-12 49397 bp Feature: gene Location: 1249591-1251114 bp Ori: AXV23866.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1249864-1250596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 49864-12 50596 bp Feature: domain Description: GIIM Note: maturase Location: 1250671-1250869 bp Feature: domain Description: GIIM Note: maturase Location: 12 50671-12 50869 bp Feature: gene Location: 1251706-1252185 bp Ori: AXV23867.1 Feature: domain Description: PHA02517 Location: 1251766-1252120 bp Feature: domain Description: PHA02 517 Location: 12 51766-12 52 12 0 bp Feature: gene Location: 1252185-1252460 bp Ori: AXV23868.1 Feature: domain Description: InsE Location: 1252206-1252458 bp Feature: domain Description: InsE Location: 12 52 2 06-12 52 458 bp Feature: gene Location: 4472487-4472630 bp Feature: gene Location: 4473066-4473200 bp Feature: gene Location: 4473395-4474918 bp Ori: AXV27155.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4473668-4474400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4473668-4474400 bp Feature: domain Description: GIIM Note: maturase Location: 4474475-4474673 bp Feature: domain Description: GIIM Note: maturase Location: 4474475-4474673 bp Feature: gene Location: 4475510-4475749 bp Ori: AXV27156.1 Feature: domain Description: PHA02517 Location: 4475513-4475684 bp Feature: domain Description: PHA02 517 Location: 4475513-4475684 bp Feature: gene Location: 4475549-4475842 bp Feature: gene Location: 4667533-4667808 bp Ori: AXV27364.1 Feature: domain Description: InsE Location: 4667554-4667806 bp Feature: domain Description: InsE Location: 4667554-4667806 bp Feature: gene Location: 4667808-4668287 bp Ori: AXV27365.1 Feature: domain Description: PHA02517 Location: 4667868-4668222 bp Feature: domain Description: PHA02 517 Location: 4667868-46682 2 2 bp Feature: gene Location: 4668879-4670402 bp Ori: AXV27366.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4669152-4669884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4669152 -4669884 bp Feature: domain Description: GIIM Note: maturase Location: 4669959-4670157 bp Feature: domain Description: GIIM Note: maturase Location: 4669959-4670157 bp Feature: gene Location: 4670594-4670965 bp Ori: AXV27367.1 Feature: domain Description: PHA02517 Location: 4670597-4670963 bp Feature: domain Description: PHA02 517 Location: 4670597-4670963 bp Feature: gene Location: 4671367-4673565 bp Ori: AXV27368.1 Feature: domain Description: TonB-siderophor Location: 4671502-4673563 bp Feature: domain Description: TonB-siderophor Location: 4671502 -4673563 bp Feature: gene Location: 4682261-4683394 bp Ori: AXV27378.1 Feature: domain Description: COG3547 Location: 4682288-4683266 bp Feature: domain Description: COG3547 Location: 4682 2 88-46832 66 bp Feature: gene Location: 4683443-4683814 bp Ori: AXV27379.1 Feature: domain Description: PHA02517 Location: 4683446-4683812 bp Feature: domain Description: PHA02 517 Location: 4683446-4683812 bp Feature: gene Location: 4684006-4685529 bp Ori: AXV27380.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4684279-4685011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46842 79-4685011 bp Feature: domain Description: GIIM Note: maturase Location: 4685086-4685284 bp Feature: domain Description: GIIM Note: maturase Location: 4685086-46852 84 bp Feature: gene Location: 4686121-4686600 bp Ori: AXV27381.1 Feature: domain Description: PHA02517 Location: 4686181-4686535 bp Feature: domain Description: PHA02 517 Location: 4686181-4686535 bp Feature: gene Location: 4686600-4686875 bp Ori: AXV27382.1 Feature: domain Description: InsE Location: 4686621-4686873 bp Feature: domain Description: InsE Location: 468662 1-4686873 bp Feature: gene Location: 4689790-4693125 bp Ori: AXV27388.1 Feature: domain Description: Peptidase_S6 Location: 4689793-4691332 bp Feature: domain Description: Peptidase_S6 Location: 4689793-4691332 bp Feature: domain Description: autotrans_barl Location: 4691896-4693123 bp Feature: domain Description: autotrans_barl Location: 4691896-469312 3 bp Feature: gene Location: 4694073-4694459 bp Ori: AXV27389.1 Feature: domain Description: PHA02517 Location: 4694076-4694457 bp Feature: domain Description: PHA02 517 Location: 4694076-4694457 bp Feature: gene Location: 4694636-4696159 bp Ori: AXV27390.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4694909-4695641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4694909-4695641 bp Feature: domain Description: GIIM Note: maturase Location: 4695716-4695914 bp Feature: domain Description: GIIM Note: maturase Location: 4695716-4695914 bp Feature: gene Location: 4696751-4697230 bp Ori: AXV27391.1 Feature: domain Description: PHA02517 Location: 4696811-4697165 bp Feature: domain Description: PHA02 517 Location: 4696811-4697165 bp Feature: gene Location: 4697230-4697505 bp Ori: AXV27392.1 Feature: domain Description: InsE Location: 4697251-4697503 bp Feature: domain Description: InsE Location: 46972 51-4697503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_38 (pfam13936), Tra8 (COG2826), InsE (COG2963), TonB-siderophor (TIGR01783), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)