myRT

myRT report for GCA_003515285.1_ASM351528v1

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Seq: CP022767.1 Ralstonia solanacearum strain T78 plasmid pRsT78, complete sequence (128742 bp)
Overview 1 RT 1: 99455-102910 bp Neighborhood of RT #1 [99455, 102972] TnpB_IS66 InsE RVT-GII HTH_32 DDE_3 PRK00215 Feature: gene Location: 99455-99865 bp Ori: AXV99250.1 Feature: domain Description: TnpB_IS66 Location: 99542-99830 bp Feature: domain Description: TnpB_IS66 Location: 99542-99830 bp Feature: gene Location: 99805-100287 bp Ori: AXV99251.1 Feature: domain Description: InsE Location: 99871-100072 bp Feature: domain Description: InsE Location: 99871 -1 00072 bp Feature: gene Location: 100368-101510 bp Ori: AXV99252.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100593-101283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00593-1 01 283 bp Feature: gene Location: 101482-102609 bp Ori: AXV99253.1 Feature: domain Description: HTH_32 Location: 101659-101896 bp Feature: domain Description: HTH_32 Location: 1 01 659-1 01 896 bp Feature: domain Description: DDE_3 Location: 102025-102475 bp Feature: domain Description: DDE_3 Location: 1 02025-1 02475 bp Feature: gene Location: 102658-102972 bp Ori: AXV99254.1 Feature: domain Description: PRK00215 Location: 102712-102910 bp Feature: domain Description: PRK0021 5 Location: 1 0271 2-1 0291 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), InsE (COG2963), RVT-GII, HTH_32 (pfam13565), DDE_3 (pfam13358), PRK00215 (transcriptional repressor LexA)

Seq: CP022766.1 Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence (2063152 bp)
Overview 1 RT 1: 623416-628133 bp Neighborhood of RT #1 [623416, 628156] RVT-GII GIIM ParB_N_like_MT YhdJ ParB_N_like_MT YhdJ Feature: gene Location: 623416-623640 bp Feature: gene Location: 623722-624078 bp Feature: gene Location: 624075-625313 bp Ori: AXV98056.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 624279-624936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 42 79-62 4936 bp Feature: domain Description: GIIM Note: maturase Location: 625017-625227 bp Feature: domain Description: GIIM Note: maturase Location: 62 5017-62 52 2 7 bp Feature: gene Location: 625539-626939 bp Ori: AXV98057.1 Feature: domain Description: ParB_N_like_MT Location: 625566-625821 bp Feature: domain Description: ParB_N_like_MT Location: 62 5566-62 582 1 bp Feature: domain Description: YhdJ Location: 626022-626922 bp Feature: domain Description: YhdJ Location: 62 602 2 -62 692 2 bp Feature: gene Location: 626936-628156 bp Ori: AXV98058.1 Feature: domain Description: ParB_N_like_MT Location: 626978-627239 bp Feature: domain Description: ParB_N_like_MT Location: 62 6978-62 72 39 bp Feature: domain Description: YhdJ Location: 627407-628133 bp Feature: domain Description: YhdJ Location: 62 7407-62 8133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ParB_N_like_MT (cd16844), YhdJ (COG0863)