myRT

myRT report for GCA_003515585.1_ASM351558v1

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Seq: CP022778.1 Ralstonia solanacearum strain SL3882 chromosome, complete genome (3942912 bp)
Overview 1 RT 1: 868676-873580 bp Neighborhood of RT #1 [868676, 873585] mono_pep_trsgly RVT-GII Pectate_lyase EcCorA-like_1 Feature: gene Location: 868676-869380 bp Ori: AXW27500.1 Gene: mtgA Feature: domain Description: mono_pep_trsgly Location: 868697-869372 bp Feature: domain Description: mono_pep_trsgly Location: 868697-869372 bp Feature: gene Location: 869757-869970 bp Feature: gene Location: 869970-871499 bp Ori: AXW30099.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 870378-871068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 870378-871 068 bp Feature: gene Location: 871521-872585 bp Feature: domain Description: Pectate_lyase Location: 871911-872451 bp Feature: domain Description: Pectate_lyase Location: 871 91 1 -872451 bp Feature: gene Location: 872623-873585 bp Ori: AXW27501.1 Gene: corA Feature: domain Description: EcCorA-like_1 Location: 872713-873580 bp Feature: domain Description: EcCorA-like_1 Location: 87271 3-873580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mono_pep_trsgly (TIGR02070), RVT-GII, Pectate_lyase (pfam03211), EcCorA-like_1 (cd12835)

Seq: CP022779.1 Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence (2082957 bp)
Overview 1 RT 1: 625837-630555 bp 2 RT 2: 783367-804393 bp 3 RT 3: 988426-993695 bp Neighborhood of RT #1 [625837, 630578] RVT-GII GIIM ParB_N_like_MT YhdJ ParB_N_like_MT YhdJ Neighborhood of RT #2 [783367, 804398] PRK12467 A_NRPS PRK12467 PRK12467 alpha_am_amid PRK12467 PP-binding PRK12316 PRK12467 entF RVT-GII PRK11169 Neighborhood of RT #3 [988426, 994201] MFS_MucK RVT-GII COG4544 PolY_like Feature: gene Location: 625837-626061 bp Feature: gene Location: 626143-626499 bp Feature: gene Location: 626496-627734 bp Ori: AXW30725.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 626700-627357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 6700-62 7357 bp Feature: domain Description: GIIM Note: maturase Location: 627438-627648 bp Feature: domain Description: GIIM Note: maturase Location: 62 7438-62 7648 bp Feature: gene Location: 627961-629361 bp Ori: AXW30726.1 Feature: domain Description: ParB_N_like_MT Location: 627988-628243 bp Feature: domain Description: ParB_N_like_MT Location: 62 7988-62 82 43 bp Feature: domain Description: YhdJ Location: 628444-629344 bp Feature: domain Description: YhdJ Location: 62 8444-62 9344 bp Feature: gene Location: 629358-630578 bp Ori: AXW30727.1 Feature: domain Description: ParB_N_like_MT Location: 629400-629661 bp Feature: domain Description: ParB_N_like_MT Location: 62 9400-62 9661 bp Feature: domain Description: YhdJ Location: 629829-630555 bp Feature: domain Description: YhdJ Location: 62 982 9-630555 bp Feature: gene Location: 783367-801228 bp Ori: AXW30823.1 Feature: domain Description: PRK12467 Location: 783583-784930 bp Feature: domain Description: PRK12 467 Location: 783583-784930 bp Feature: domain Description: A_NRPS Location: 785092-786532 bp Feature: domain Description: A_NRPS Location: 785092 -786532 bp Feature: domain Description: PRK12467 Location: 786565-789961 bp Feature: domain Description: PRK12 467 Location: 786565-789961 bp Feature: domain Description: PRK12467 Location: 790003-791332 bp Feature: domain Description: PRK12 467 Location: 790003-791332 bp Feature: domain Description: alpha_am_amid Location: 791512-791770 bp Feature: domain Description: alpha_am_amid Location: 791512 -791770 bp Feature: domain Description: PRK12467 Location: 791815-796075 bp Feature: domain Description: PRK12 467 Location: 791815-796075 bp Feature: domain Description: PP-binding Location: 796129-796318 bp Feature: domain Description: PP-binding Location: 79612 9-796318 bp Feature: domain Description: PRK12316 Location: 796342-799510 bp Feature: domain Description: PRK12 316 Location: 796342 -799510 bp Feature: domain Description: PRK12467 Location: 799666-799849 bp Feature: domain Description: PRK12 467 Location: 799666-799849 bp Feature: domain Description: entF Location: 800350-800749 bp Feature: domain Description: entF Location: 800350-800749 bp Feature: gene Location: 801539-801752 bp Feature: gene Location: 801752-803281 bp Ori: AXW31781.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802160-802850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802 160-802 850 bp Feature: gene Location: 803419-803730 bp Feature: gene Location: 803943-804398 bp Ori: AXW31782.1 Feature: domain Description: PRK11169 Location: 803946-804393 bp Feature: domain Description: PRK11169 Location: 803946-804393 bp Feature: gene Location: 988426-989682 bp Ori: AXW30963.1 Feature: domain Description: MFS_MucK Location: 988519-989659 bp Feature: domain Description: MFS_MucK Location: 988519-989659 bp Feature: gene Location: 989975-990188 bp Feature: gene Location: 990188-991717 bp Ori: AXW31795.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990596-991286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990596-9912 86 bp Feature: gene Location: 991762-992697 bp Ori: AXW30964.1 Feature: domain Description: COG4544 Location: 991891-992371 bp Feature: domain Description: COG4544 Location: 991891-992 371 bp Feature: gene Location: 992630-994201 bp Ori: AXW30965.1 Feature: domain Description: PolY_like Location: 992645-993695 bp Feature: domain Description: PolY_like Location: 992 645-993695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ParB_N_like_MT (cd16844), YhdJ (COG0863), PRK12467 (peptide synthase; Provisional), A_NRPS (cd05930), alpha_am_amid (TIGR03443), PP-binding (pfam00550), PRK12316 (peptide synthase; Provisional), entF (PRK10252)
PRK11169 (leucine-responsive transcriptional regulator Lrp), MFS_MucK (cd17371), COG4544 (Uncharacterized conserved protein ), PolY_like (cd03468)