myRT

myRT report for GCA_003544875.1_ASM354487v1

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Seq: CP032093.1 Vibrio alfacsensis strain CAIM 1831 chromosome I, complete sequence (3136974 bp)
Overview 1 RT 1: 1353316-1358220 bp 2 RT 2: 1442754-1448037 bp Neighborhood of RT #1 [1353316, 1358220] Cas2_I_II_III Cas2_I_II_III RVT-CRISPR Cas1_I-II-III RVT-CRISPR Neighborhood of RT #2 [1442754, 1448303] DUF1887 CRISPR_Cas2 CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III DUF5051 TIGR03986 Feature: gene Location: 1353316-1353534 bp Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 1353328-1353523 bp Feature: domain Description: Cas2_I_II_III Location: 1 353328-1 353523 bp Feature: gene Location: 1353555-1353836 bp Ori: AXY00912.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 1353573-1353789 bp Feature: domain Description: Cas2_I_II_III Location: 1 353573-1 353789 bp Feature: gene Location: 1353850-1355472 bp Ori: AXY00913.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1353853-1354222 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 353853-1 354222 bp Feature: domain Description: Cas1_I-II-III Location: 1354486-1355431 bp Feature: domain Description: Cas1 _I-II-III Location: 1 354486-1 355431 bp Feature: gene Location: 1355427-1355939 bp Ori: AXY00914.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1355649-1355871 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 355649-1 355871 bp Feature: gene Location: 1355927-1356943 bp Feature: gene Location: 1357597-1358220 bp Feature: gene Location: 1442754-1443902 bp Ori: AXY00986.1 Feature: domain Description: DUF1887 Location: 1442781-1443870 bp Feature: domain Description: DUF1 887 Location: 1 442781 -1 443870 bp Feature: gene Location: 1443965-1444240 bp Ori: AXY02334.1 Gene: cas2 Feature: domain Description: CRISPR_Cas2 Location: 1443974-1444187 bp Feature: domain Description: CRISPR_Cas2 Location: 1 443974-1 4441 87 bp Feature: gene Location: 1444237-1447053 bp Ori: AXY00987.1 Gene: cas1 Feature: domain Description: CRISPR_Cas6 Location: 1444789-1445080 bp Feature: domain Description: CRISPR_Cas6 Location: 1 444789-1 445080 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1445314-1445914 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 44531 4-1 44591 4 bp Feature: domain Description: Cas1_I-II-III Location: 1446100-1447018 bp Feature: domain Description: Cas1 _I-II-III Location: 1 4461 00-1 44701 8 bp Feature: gene Location: 1447050-1447541 bp Ori: AXY00988.1 Feature: domain Description: DUF5051 Location: 1447059-1447509 bp Feature: domain Description: DUF5051 Location: 1 447059-1 447509 bp Feature: gene Location: 1447614-1448303 bp Ori: AXY00989.1 Feature: domain Description: TIGR03986 Location: 1447644-1448037 bp Feature: domain Description: TIGR03986 Location: 1 447644-1 448037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), DUF1887 (pfam09002), CRISPR_Cas2 (pfam09827), CRISPR_Cas6 (pfam10040), DUF5051 (pfam16473), TIGR03986 (CRISPR-associated protein)