myRT

myRT report for GCA_003571545.1_ASM357154v1

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Seq: CP032178.1 Klebsiella pneumoniae strain AR_0135 chromosome, complete genome (5425436 bp)
Overview 1 RT 1: 629515-633771 bp 2 RT 2: 5388312-5393890 bp Neighborhood of RT #1 [629515, 633785] PRK10724 SmpB RVT-Retrons PRK09678 D Neighborhood of RT #2 [5388312, 5394066] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 629515-629991 bp Ori: AXZ30470.1 Feature: domain Description: PRK10724 Location: 629521-629986 bp Feature: domain Description: PRK1 0724 Location: 629521 -629986 bp Feature: gene Location: 630102-630584 bp Ori: AXZ30471.1 Gene: smpB Feature: domain Description: SmpB Location: 630132-630576 bp Feature: domain Description: SmpB Location: 6301 32-630576 bp Feature: gene Location: 631199-631972 bp Ori: AXZ30472.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 631259-631796 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 631 259-631 796 bp Feature: gene Location: 632376-632594 bp Ori: AXZ30473.1 Feature: domain Description: PRK09678 Location: 632379-632577 bp Feature: domain Description: PRK09678 Location: 632379-632577 bp Feature: gene Location: 632685-633785 bp Ori: AXZ30474.1 Feature: domain Description: D Location: 632700-633771 bp Feature: domain Description: D Location: 632700-633771 bp Feature: gene Location: 5388312-5388542 bp Feature: gene Location: 5389425-5391701 bp Ori: AXZ34848.1 Feature: domain Description: AAA_15 Location: 5389458-5390466 bp Feature: domain Description: AAA_1 5 Location: 5389458-5390466 bp Feature: gene Location: 5391816-5392916 bp Ori: AXZ34849.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5391999-5392527 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5391 999-5392527 bp Feature: gene Location: 5393397-5393552 bp Feature: gene Location: 5393572-5394066 bp Ori: AXZ35122.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 5393716-5393890 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 539371 6-5393890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional), D (PHA02561), AAA_15 (pfam13175), Nuc_deoxyrib_tr (pfam05014)

Seq: CP032176.1 Klebsiella pneumoniae strain AR_0135 plasmid unnamed1, complete sequence (90682 bp)
Overview 1 RT 1: 22869-26358 bp 2 RT 2: 38924-42666 bp Neighborhood of RT #1 [22869, 26358] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #2 [38924, 42683] ArdC RVT-GII PRK10276 Feature: gene Location: 22869-23557 bp Feature: domain Description: InsE Location: 22878-23163 bp Feature: domain Description: InsE Location: 2 2 878-2 3163 bp Feature: gene Location: 23484-23921 bp Feature: gene Location: 24215-25738 bp Ori: AXZ29841.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24488-25220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4488-2 52 2 0 bp Feature: domain Description: GIIM Note: maturase Location: 25295-25493 bp Feature: domain Description: GIIM Note: maturase Location: 2 52 95-2 5493 bp Feature: gene Location: 25819-25998 bp Feature: domain Description: PHA02517 Location: 25822-25999 bp Feature: domain Description: PHA02 517 Location: 2 582 2 -2 5999 bp Feature: gene Location: 26146-26358 bp Feature: gene Location: 38924-39889 bp Ori: AXZ29857.1 Feature: domain Description: ArdC Location: 39050-39884 bp Feature: domain Description: ArdC Location: 39050-39884 bp Feature: gene Location: 40097-40366 bp Feature: gene Location: 40359-41843 bp Ori: AXZ29859.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40761-41451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40761-41451 bp Feature: gene Location: 41843-42094 bp Feature: gene Location: 42252-42683 bp Ori: AXZ29861.1 Feature: domain Description: PRK10276 Location: 42303-42666 bp Feature: domain Description: PRK102 76 Location: 42 303-42 666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), ArdC (COG4227), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)