myRT

myRT report for GCA_003571665.1_ASM357166v1

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Seq: CP032201.1 Escherichia coli strain AR_0086 chromosome, complete genome (5107215 bp)
Overview 1 RT 1: 54223-58954 bp 2 RT 2: 3775802-3780700 bp Neighborhood of RT #1 [54223, 58965] prfC PRK10597 RVT-Retrons TIR_2 SR_ResInv Caudo_TAP Neighborhood of RT #2 [3775802, 3780700] RVT-Retrons Feature: gene Location: 54223-55809 bp Ori: AXZ00306.1 Gene: prfC Feature: domain Description: prfC Location: 54241-55807 bp Feature: domain Description: prfC Location: 54241 -55807 bp Feature: gene Location: 56029-56289 bp Ori: AXZ00307.1 Feature: domain Description: PRK10597 Location: 56032-56272 bp Feature: domain Description: PRK1 0597 Location: 56032-56272 bp Feature: gene Location: 56647-58251 bp Ori: AXZ00308.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56938-57529 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56938-57529 bp Feature: domain Description: TIR_2 Location: 57856-58189 bp Feature: domain Description: TIR_2 Location: 57856-581 89 bp Feature: gene Location: 58435-58626 bp Feature: domain Description: SR_ResInv Location: 58438-58546 bp Feature: domain Description: SR_ResInv Location: 58438-58546 bp Feature: gene Location: 58696-58965 bp Ori: AXZ00309.1 Feature: domain Description: Caudo_TAP Location: 58789-58954 bp Feature: domain Description: Caudo_TAP Location: 58789-58954 bp Feature: gene Location: 3775802-3776317 bp Feature: gene Location: 3776314-3777441 bp Feature: gene Location: 3777688-3779445 bp Ori: AXZ03753.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3777832-3778450 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3777832-3778450 bp Feature: gene Location: 3780016-3780255 bp Feature: gene Location: 3780470-3780700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676), SR_ResInv (cd03768), Caudo_TAP (pfam02413)

Seq: CP032202.1 Escherichia coli strain AR_0086 plasmid unnamed1, complete sequence (140509 bp)
Overview 1 RT 1: 63691-66581 bp 2 RT 2: 77318-81106 bp Neighborhood of RT #1 [63691, 66981] Sigma70_r4_2 Sigma70_r4_2 PRK10173 RVT-GII InsE Neighborhood of RT #2 [77318, 81144] InsE RVT-GII GIIM PHA02517 InsE Feature: gene Location: 63691-64176 bp Ori: AXZ05316.1 Feature: domain Description: Sigma70_r4_2 Location: 63751-63823 bp Feature: domain Description: Sigma70_r4_2 Location: 63751-6382 3 bp Feature: domain Description: Sigma70_r4_2 Location: 63892-63952 bp Feature: domain Description: Sigma70_r4_2 Location: 63892 -63952 bp Feature: gene Location: 64298-65042 bp Feature: domain Description: PRK10173 Location: 64301-64739 bp Feature: domain Description: PRK10173 Location: 64301-64739 bp Feature: gene Location: 65081-65584 bp Ori: AXZ05317.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65354-65426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65354-6542 6 bp Feature: gene Location: 65878-66249 bp Feature: gene Location: 66242-66981 bp Feature: domain Description: InsE Location: 66245-66581 bp Feature: domain Description: InsE Location: 662 45-66581 bp Feature: gene Location: 77318-78057 bp Feature: domain Description: InsE Location: 77321-77657 bp Feature: domain Description: InsE Location: 7732 1-77657 bp Feature: gene Location: 78050-78421 bp Feature: gene Location: 78715-80238 bp Ori: AXZ05332.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78988-79720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78988-7972 0 bp Feature: domain Description: GIIM Note: maturase Location: 79795-79993 bp Feature: domain Description: GIIM Note: maturase Location: 79795-79993 bp Feature: gene Location: 80328-80711 bp Feature: domain Description: PHA02517 Location: 80334-80667 bp Feature: domain Description: PHA02 517 Location: 80334-80667 bp Feature: gene Location: 80740-81144 bp Ori: AXZ05333.1 Feature: domain Description: InsE Location: 80770-81106 bp Feature: domain Description: InsE Location: 80770-81106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sigma70_r4_2 (pfam08281), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, InsE (COG2963), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)