myRT

myRT report for GCA_003571705.1_ASM357170v1

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Seq: CP032209.1 Klebsiella pneumoniae strain AR_0109 plasmid unnamed3, complete sequence (161618 bp)
Overview 1 RT 1: 56167-59248 bp Neighborhood of RT #1 [56167, 59262] DUF1472 RVT-GII PRK10276 Feature: gene Location: 56167-56259 bp Feature: domain Description: DUF1472 Location: 56179-56245 bp Feature: domain Description: DUF1 472 Location: 561 79-56245 bp Feature: gene Location: 56483-56713 bp Feature: gene Location: 56947-58431 bp Ori: AXZ56529.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57349-58039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57349-58039 bp Feature: gene Location: 58431-58682 bp Feature: gene Location: 58837-59262 bp Ori: AXZ56531.1 Feature: domain Description: PRK10276 Location: 58840-59248 bp Feature: domain Description: PRK1 0276 Location: 58840-59248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP032207.1 Klebsiella pneumoniae strain AR_0109 chromosome, complete genome (5280811 bp)
Overview 1 RT 1: 3697191-3702053 bp 2 RT 2: 4041436-4045544 bp 3 RT 3: 4180582-4184718 bp 4 RT 4: 4261894-4264402 bp 5 RT 5: 4304280-4306788 bp Neighborhood of RT #1 [3697191, 3702079] int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [4041436, 4045546] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [4180582, 4184720] RVT-GII PRK10276 umuC Neighborhood of RT #4 [4261894, 4264402] RVT-GII Neighborhood of RT #5 [4304280, 4306788] RVT-GII Feature: gene Location: 3697191-3698243 bp Ori: AXZ54430.1 Feature: domain Description: int Location: 3697194-3698193 bp Feature: domain Description: int Location: 3697194-3698193 bp Feature: gene Location: 3698411-3698662 bp Feature: gene Location: 3698662-3700146 bp Ori: AXZ54432.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3699064-3699754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3699064-3699754 bp Feature: gene Location: 3700245-3701189 bp Feature: gene Location: 3701201-3702079 bp Ori: AXZ54434.1 Feature: domain Description: Phage_CI_repr Location: 3701228-3701411 bp Feature: domain Description: Phage_CI_repr Location: 37012 2 8-3701411 bp Feature: domain Description: Phage_CI_repr Location: 3701540-3701732 bp Feature: domain Description: Phage_CI_repr Location: 3701540-3701732 bp Feature: domain Description: Phage_CI_C Location: 3701759-3702053 bp Feature: domain Description: Phage_CI_C Location: 3701759-3702 053 bp Feature: gene Location: 4041436-4041678 bp Ori: AXZ54754.1 Feature: domain Description: DinI Location: 4041487-4041667 bp Feature: domain Description: DinI Location: 4041487-4041667 bp Feature: gene Location: 4042045-4042296 bp Feature: gene Location: 4042296-4043780 bp Ori: AXZ54756.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4042698-4043388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4042 698-4043388 bp Feature: gene Location: 4043859-4044278 bp Ori: AXZ54757.1 Feature: domain Description: PRK10276 Location: 4043862-4044273 bp Feature: domain Description: PRK102 76 Location: 4043862 -40442 73 bp Feature: gene Location: 4044281-4045546 bp Ori: AXZ54758.1 Gene: umuC Feature: domain Description: umuC Location: 4044284-4045544 bp Feature: domain Description: umuC Location: 40442 84-4045544 bp Feature: gene Location: 4180582-4180671 bp Feature: gene Location: 4181219-4181470 bp Feature: gene Location: 4181470-4182954 bp Ori: AXZ54892.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4181872-4182562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4181872 -4182 562 bp Feature: gene Location: 4183034-4183453 bp Ori: AXZ54893.1 Feature: domain Description: PRK10276 Location: 4183037-4183448 bp Feature: domain Description: PRK102 76 Location: 4183037-4183448 bp Feature: gene Location: 4183455-4184720 bp Ori: AXZ54894.1 Gene: umuC Feature: domain Description: umuC Location: 4183458-4184718 bp Feature: domain Description: umuC Location: 4183458-4184718 bp Feature: gene Location: 4261894-4262103 bp Feature: gene Location: 4262305-4262556 bp Feature: gene Location: 4262556-4264040 bp Ori: AXZ54985.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4262958-4263648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 62 958-42 63648 bp Feature: gene Location: 4264033-4264104 bp Feature: gene Location: 4264118-4264402 bp Feature: gene Location: 4304280-4304489 bp Feature: gene Location: 4304691-4304942 bp Feature: gene Location: 4304942-4306426 bp Ori: AXZ55043.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4305344-4306034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4305344-4306034 bp Feature: gene Location: 4306419-4306490 bp Feature: gene Location: 4306504-4306788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP032212.1 Klebsiella pneumoniae strain AR_0109 plasmid unnamed6, complete sequence (83015 bp)
Overview 1 RT 1: 15699-19188 bp Neighborhood of RT #1 [15699, 19188] InsE RVT-GII GIIM PHA02517 Feature: gene Location: 15699-16387 bp Feature: domain Description: InsE Location: 15708-15993 bp Feature: domain Description: InsE Location: 15708-15993 bp Feature: gene Location: 16314-16751 bp Feature: gene Location: 17045-18568 bp Ori: AXZ56698.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17318-18050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173 18-18050 bp Feature: domain Description: GIIM Note: maturase Location: 18125-18323 bp Feature: domain Description: GIIM Note: maturase Location: 18125-183 23 bp Feature: gene Location: 18649-18828 bp Feature: domain Description: PHA02517 Location: 18652-18829 bp Feature: domain Description: PHA02517 Location: 18652-18829 bp Feature: gene Location: 18976-19188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: CP032208.1 Klebsiella pneumoniae strain AR_0109 plasmid unnamed2, complete sequence (310872 bp)
Overview 1 RT 1: 129235-133095 bp 2 RT 2: 264471-267929 bp Neighborhood of RT #1 [129235, 133095] HHA RVT-GII INT_Cre_C Neighborhood of RT #2 [264471, 267943] Y1_Tnp InsQ RVT-GII PRK10276 Feature: gene Location: 129235-129489 bp Ori: AXZ56269.1 Feature: domain Description: HHA Location: 129286-129469 bp Feature: domain Description: HHA Location: 129286-1294 69 bp Feature: gene Location: 129754-129948 bp Feature: gene Location: 130006-131490 bp Ori: AXZ56271.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130408-131098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1304 08-131098 bp Feature: gene Location: 131576-132712 bp Ori: AXZ56272.1 Feature: domain Description: INT_Cre_C Location: 131999-132653 bp Feature: domain Description: INT_Cre_C Location: 131999-132653 bp Feature: gene Location: 132778-133095 bp Feature: gene Location: 264471-264686 bp Gene: tnpA Feature: domain Description: Y1_Tnp Location: 264474-264678 bp Feature: domain Description: Y1_Tnp Location: 264 4 74 -264 678 bp Feature: gene Location: 264688-265257 bp Feature: domain Description: InsQ Location: 264697-265207 bp Feature: domain Description: InsQ Location: 264 697-265207 bp Feature: gene Location: 265625-267109 bp Ori: AXZ56403.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266027-266717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266027-266717 bp Feature: gene Location: 267109-267360 bp Feature: gene Location: 267521-267943 bp Ori: AXZ56459.1 Feature: domain Description: PRK10276 Location: 267527-267929 bp Feature: domain Description: PRK10276 Location: 267527-267929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799), Y1_Tnp (pfam01797), InsQ (COG0675), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)