myRT

myRT report for GCA_003571745.1_ASM357174v1

Download annotations/find similar RTs

Seq: CP032223.1 Klebsiella pneumoniae strain AR_0046 plasmid unnamed1, complete sequence (201149 bp)
Overview 1 RT 1: 25747-29212 bp 2 RT 2: 148173-152013 bp Neighborhood of RT #1 [25747, 29220] PRK10276 RVT-GII InsQ Y1_Tnp Neighborhood of RT #2 [148173, 152033] INT_Cre_C RVT-GII HHA Feature: gene Location: 25747-26169 bp Ori: AXZ61784.1 Feature: domain Description: PRK10276 Location: 25753-26155 bp Feature: domain Description: PRK1 0276 Location: 25753-261 55 bp Feature: gene Location: 26331-26582 bp Feature: gene Location: 26582-28066 bp Ori: AXZ61786.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26984-27674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26984-27674 bp Feature: gene Location: 28434-29003 bp Feature: domain Description: InsQ Location: 28443-28953 bp Feature: domain Description: InsQ Location: 28443-28953 bp Feature: gene Location: 29005-29220 bp Gene: tnpA Feature: domain Description: Y1_Tnp Location: 29008-29212 bp Feature: domain Description: Y1 _Tnp Location: 29008-2921 2 bp Feature: gene Location: 148173-148490 bp Feature: gene Location: 148556-149692 bp Ori: AXZ61908.1 Feature: domain Description: INT_Cre_C Location: 148979-149633 bp Feature: domain Description: INT_Cre_C Location: 1 48979-1 49633 bp Feature: gene Location: 149778-151262 bp Ori: AXZ61909.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150180-150870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 501 80-1 50870 bp Feature: gene Location: 151262-151513 bp Feature: gene Location: 151779-152033 bp Ori: AXZ61911.1 Feature: domain Description: HHA Location: 151830-152013 bp Feature: domain Description: HHA Location: 1 51 830-1 5201 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsQ (COG0675), Y1_Tnp (pfam01797), INT_Cre_C (cd00799), HHA (pfam05321)

Seq: CP032227.1 Klebsiella pneumoniae strain AR_0046 plasmid unnamed5, complete sequence (49701 bp)
Overview 1 RT 1: 6768-10221 bp Neighborhood of RT #1 [6768, 10259] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 6768-7199 bp Ori: AXZ62268.1 Feature: domain Description: PRK10276 Location: 6819-7182 bp Feature: domain Description: PRK102 76 Location: 6819-7182 bp Feature: gene Location: 7357-7608 bp Feature: gene Location: 7608-9092 bp Ori: AXZ62270.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8010-8700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8010-8700 bp Feature: gene Location: 9244-9941 bp Feature: domain Description: Zn_Tnp_IS1 Location: 9250-9352 bp Feature: domain Description: Zn_Tnp_IS1 Location: 92 50-9352 bp Feature: domain Description: HTH_Tnp_IS1 Location: 9373-9505 bp Feature: domain Description: HTH_Tnp_IS1 Location: 9373-9505 bp Feature: gene Location: 9951-10259 bp Feature: domain Description: Rep_3 Location: 9957-10221 bp Feature: domain Description: Rep_3 Location: 9957-102 2 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)

Seq: CP032222.1 Klebsiella pneumoniae strain AR_0046 chromosome, complete genome (5250521 bp)
Overview 1 RT 1: 712412-716520 bp 2 RT 2: 1963644-1967521 bp 3 RT 3: 3181426-3184484 bp Neighborhood of RT #1 [712412, 716522] DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [1963644, 1967521] PRK10276 RVT-GII Neighborhood of RT #3 [3181426, 3184486] RVT-Retrons HTH_XRE DinI Feature: gene Location: 712412-712654 bp Ori: AXZ57391.1 Feature: domain Description: DinI Location: 712463-712643 bp Feature: domain Description: DinI Location: 712463 -712643 bp Feature: gene Location: 713021-713272 bp Feature: gene Location: 713272-714756 bp Ori: AXZ57393.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 713674-714364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 713 674-7143 64 bp Feature: gene Location: 714835-715254 bp Ori: AXZ57394.1 Feature: domain Description: PRK10276 Location: 714838-715249 bp Feature: domain Description: PRK10276 Location: 71483 8-715249 bp Feature: gene Location: 715257-716522 bp Ori: AXZ57395.1 Gene: umuC Feature: domain Description: umuC Location: 715260-716520 bp Feature: domain Description: umuC Location: 715260-716520 bp Feature: gene Location: 1963644-1964015 bp Ori: AXZ58570.1 Feature: domain Description: PRK10276 Location: 1963689-1963851 bp Feature: domain Description: PRK10276 Location: 1963 689-1963 851 bp Feature: gene Location: 1963972-1964211 bp Feature: gene Location: 1964288-1965772 bp Ori: AXZ58572.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1964690-1965380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1964690-19653 80 bp Feature: gene Location: 1965772-1966023 bp Feature: gene Location: 1966685-1967521 bp Feature: gene Location: 3181426-3181620 bp Feature: gene Location: 3181619-3182050 bp Feature: gene Location: 3182189-3183139 bp Ori: AXZ59674.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3182369-3182912 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 1823 69-3 182912 bp Feature: gene Location: 3183117-3183425 bp Ori: AXZ59675.1 Feature: domain Description: HTH_XRE Location: 3183129-3183294 bp Feature: domain Description: HTH_XRE Location: 3 183 129-3 183 294 bp Feature: gene Location: 3184046-3184486 bp Ori: AXZ59676.1 Feature: domain Description: DinI Location: 3184301-3184484 bp Feature: domain Description: DinI Location: 3 1843 01-3 184484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-Retrons, HTH_XRE (smart00530)