myRT

myRT report for GCA_003571785.1_ASM357178v1

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Seq: CP032258.1 Escherichia coli strain AR_0067 plasmid unnamed1, complete sequence (128033 bp)
Overview 1 RT 1: 20796-23686 bp 2 RT 2: 34423-38211 bp Neighborhood of RT #1 [20796, 24086] Sigma70_r4_2 Sigma70_r4_2 PRK10173 RVT-GII InsE Neighborhood of RT #2 [34423, 38249] InsE RVT-GII GIIM PHA02517 InsE Feature: gene Location: 20796-21281 bp Ori: AXZ83720.1 Feature: domain Description: Sigma70_r4_2 Location: 20856-20928 bp Feature: domain Description: Sigma70_r4_2 Location: 20856-20928 bp Feature: domain Description: Sigma70_r4_2 Location: 20997-21057 bp Feature: domain Description: Sigma70_r4_2 Location: 20997-21 057 bp Feature: gene Location: 21403-22147 bp Feature: domain Description: PRK10173 Location: 21406-21844 bp Feature: domain Description: PRK1 01 73 Location: 21 406-21 844 bp Feature: gene Location: 22186-22689 bp Ori: AXZ83721.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22459-22528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22459-22528 bp Feature: gene Location: 22983-23354 bp Feature: gene Location: 23347-24086 bp Feature: domain Description: InsE Location: 23350-23686 bp Feature: domain Description: InsE Location: 23350-23686 bp Feature: gene Location: 34423-35162 bp Feature: domain Description: InsE Location: 34426-34762 bp Feature: domain Description: InsE Location: 34426-34762 bp Feature: gene Location: 35155-35526 bp Feature: gene Location: 35820-37343 bp Ori: AXZ83736.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36093-36825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36093-36825 bp Feature: domain Description: GIIM Note: maturase Location: 36900-37098 bp Feature: domain Description: GIIM Note: maturase Location: 36900-37098 bp Feature: gene Location: 37433-37816 bp Feature: domain Description: PHA02517 Location: 37439-37772 bp Feature: domain Description: PHA0251 7 Location: 37439-37772 bp Feature: gene Location: 37845-38249 bp Ori: AXZ83737.1 Feature: domain Description: InsE Location: 37875-38211 bp Feature: domain Description: InsE Location: 37875-3821 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sigma70_r4_2 (pfam08281), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, InsE (COG2963), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: CP032261.1 Escherichia coli strain AR_0067 chromosome, complete genome (5119553 bp)
Overview 1 RT 1: 3199858-3204444 bp 2 RT 2: 3913815-3919846 bp Neighborhood of RT #1 [3199858, 3204444] Q FRG RVT-Retrons HTH_XRE Neighborhood of RT #2 [3913815, 3919846] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 3199858-3200892 bp Ori: AXZ87035.1 Feature: domain Description: Q Location: 3199861-3200884 bp Feature: domain Description: Q Location: 3199861-32 00884 bp Feature: gene Location: 3201405-3202769 bp Ori: AXZ87036.1 Feature: domain Description: FRG Location: 3201972-3202257 bp Feature: domain Description: FRG Location: 32 01972 -32 02 2 57 bp Feature: gene Location: 3202878-3203828 bp Ori: AXZ87037.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3203058-3203601 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 03058-32 03601 bp Feature: gene Location: 3203794-3204114 bp Ori: AXZ87038.1 Feature: domain Description: HTH_XRE Location: 3203809-3203968 bp Feature: domain Description: HTH_XRE Location: 32 03809-32 03968 bp Feature: gene Location: 3204151-3204444 bp Feature: gene Location: 3913815-3914735 bp Ori: AXZ87654.1 Feature: domain Description: AbiEii Location: 3913857-3914598 bp Feature: domain Description: AbiEii Location: 3913857-3914598 bp Feature: gene Location: 3914722-3915525 bp Ori: AXZ87655.1 Feature: domain Description: AbiEi_3_N Location: 3914755-3915016 bp Feature: domain Description: AbiEi_3_N Location: 3914755-3915016 bp Feature: domain Description: AbiEi_3 Location: 3915028-3915484 bp Feature: domain Description: AbiEi_3 Location: 391502 8-3915484 bp Feature: gene Location: 3915820-3919029 bp Ori: AXZ87656.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3916348-3916837 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3916348-3916837 bp Feature: domain Description: nitrilase Location: 3918343-3918940 bp Feature: domain Description: nitrilase Location: 3918343-3918940 bp Feature: gene Location: 3919190-3919330 bp Ori: AXZ87657.1 Feature: domain Description: Phage_ASH Location: 3919217-3919310 bp Feature: domain Description: Phage_ASH Location: 39192 17-3919310 bp Feature: gene Location: 3919376-3919846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), FRG (smart00901), RVT-Retrons, HTH_XRE (smart00530), AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)