myRT

myRT report for GCA_003573975.1_ASM357397v1

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Seq: AP018533.1 Clostridiales bacterium CCNA10 DNA, complete genome (3558314 bp)
Overview 1 RT 1: 245062-251198 bp 2 RT 2: 389223-390986 bp 3 RT 3: 903887-908182 bp 4 RT 4: 1095585-1098633 bp 5 RT 5: 1734919-1739030 bp Neighborhood of RT #1 [245062, 251284] Relaxase RVT-Retrons ArdA DUF3846 DUF4316 Neighborhood of RT #2 [389223, 390986] RVT-DGRs Neighborhood of RT #3 [903887, 908277] Avd_like RVT-DGRs ChiA1_BD ChiA1_BD Neighborhood of RT #4 [1095585, 1098633] COG4877 RVT-DGRs Neighborhood of RT #5 [1734919, 1739030] Avd_like RVT-DGRs Feature: gene Location: 245062-246411 bp Feature: domain Description: Relaxase Location: 245092-245779 bp Feature: domain Description: Relaxase Location: 245092-245779 bp Feature: gene Location: 246490-246858 bp Feature: gene Location: 247123-248157 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 247282-247816 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 247282-24781 6 bp Feature: gene Location: 248555-248746 bp Feature: gene Location: 249425-251284 bp Feature: domain Description: ArdA Location: 249467-249989 bp Feature: domain Description: ArdA Location: 249467-249989 bp Feature: domain Description: DUF3846 Location: 250685-250952 bp Feature: domain Description: DUF3846 Location: 250685-250952 bp Feature: domain Description: DUF4316 Location: 251039-251198 bp Feature: domain Description: DUF431 6 Location: 251 039-251 1 98 bp Feature: gene Location: 389223-389381 bp Feature: gene Location: 389398-389604 bp Feature: gene Location: 389664-390467 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 389670-390093 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 389670-390093 bp Feature: gene Location: 390481-390825 bp Feature: gene Location: 390843-390986 bp Feature: gene Location: 903887-904084 bp Feature: gene Location: 904053-904406 bp Feature: domain Description: Avd_like Location: 904101-904389 bp Feature: domain Description: Avd_like Location: 9041 01 -904389 bp Feature: gene Location: 904759-905982 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 905026-905737 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 905026-905737 bp Feature: gene Location: 905897-907753 bp Feature: gene Location: 907750-908277 bp Feature: domain Description: ChiA1_BD Location: 907918-908044 bp Feature: domain Description: ChiA1 _BD Location: 90791 8-908044 bp Feature: domain Description: ChiA1_BD Location: 908104-908182 bp Feature: domain Description: ChiA1 _BD Location: 9081 04-9081 82 bp Feature: gene Location: 1095585-1095785 bp Feature: domain Description: COG4877 Location: 1095600-1095753 bp Feature: domain Description: COG4877 Location: 1 095600-1 095753 bp Feature: gene Location: 1095799-1096266 bp Feature: gene Location: 1096665-1097825 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1096923-1097568 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 096923-1 097568 bp Feature: gene Location: 1097945-1098355 bp Feature: gene Location: 1098355-1098633 bp Feature: gene Location: 1734919-1735509 bp Feature: domain Description: Avd_like Location: 1735129-1735396 bp Feature: domain Description: Avd_like Location: 1 7351 29-1 735396 bp Feature: gene Location: 1735549-1735695 bp Feature: gene Location: 1735713-1737134 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1736121-1736748 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 7361 21 -1 736748 bp Feature: gene Location: 1737159-1738436 bp Feature: gene Location: 1738449-1739030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), RVT-Retrons, ArdA (pfam07275), DUF3846 (pfam12957), DUF4316 (pfam14195), RVT-DGRs, Avd_like (cd16376), ChiA1_BD (cd12214), COG4877 (Uncharacterized protein )