myRT

myRT report for GCA_003574015.1_ASM357401v1

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Seq: AP018532.1 Oscillibacter sp. PEA192 DNA, complete genome (3320462 bp)
Overview 1 RT 1: 257134-261421 bp 2 RT 2: 1340668-1351258 bp Neighborhood of RT #1 [257134, 261438] Maff2 RVT-GII Intron_maturas2 HNHc IME4 Neighborhood of RT #2 [1340668, 1351293] SCAD_SBCAD fixB rubredoxin IscR RVT-Retrons Phage_int_SAM_1 INT_C_like_2 NosD_copper_fam NosD_copper_fam SLH SLH Feature: gene Location: 257134-257352 bp Feature: domain Description: Maff2 Location: 257137-257344 bp Feature: domain Description: Maff2 Location: 2571 37-257344 bp Feature: gene Location: 257422-258093 bp Feature: gene Location: 258669-260501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258933-259764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258933-259764 bp Feature: domain Description: Intron_maturas2 Location: 259836-260151 bp Feature: domain Description: Intron_maturas2 Location: 259836-2601 51 bp Feature: domain Description: HNHc Note: nucleases Location: 260298-260472 bp Feature: domain Description: HNHc Note: nucleases Location: 260298-260472 bp Feature: gene Location: 260640-260879 bp Feature: gene Location: 260893-261438 bp Feature: domain Description: IME4 Location: 260902-261421 bp Feature: domain Description: IME4 Location: 260902-261 421 bp Feature: gene Location: 1340668-1342578 bp Feature: domain Description: SCAD_SBCAD Location: 1340692-1341802 bp Feature: domain Description: SCAD_SBCAD Location: 1 340692-1 341 802 bp Feature: domain Description: fixB Location: 1341994-1342345 bp Feature: domain Description: fixB Location: 1 341 994-1 342345 bp Feature: domain Description: rubredoxin Location: 1342429-1342573 bp Feature: domain Description: rubredoxin Location: 1 342429-1 342573 bp Feature: gene Location: 1342644-1343048 bp Feature: domain Description: IscR Location: 1342647-1343040 bp Feature: domain Description: IscR Location: 1 342647-1 343040 bp Feature: gene Location: 1343359-1344753 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1343905-1344457 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 343905-1 344457 bp Feature: gene Location: 1344892-1345737 bp Feature: domain Description: Phage_int_SAM_1 Location: 1344928-1345150 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 344928-1 3451 50 bp Feature: domain Description: INT_C_like_2 Location: 1345225-1345717 bp Feature: domain Description: INT_C_like_2 Location: 1 345225-1 34571 7 bp Feature: gene Location: 1346353-1351293 bp Feature: domain Description: NosD_copper_fam Location: 1349212-1349500 bp Feature: domain Description: NosD_copper_fam Location: 1 34921 2-1 349500 bp Feature: domain Description: NosD_copper_fam Location: 1349857-1350130 bp Feature: domain Description: NosD_copper_fam Location: 1 349857-1 3501 30 bp Feature: domain Description: SLH Location: 1350808-1350928 bp Feature: domain Description: SLH Location: 1 350808-1 350928 bp Feature: domain Description: SLH Location: 1351129-1351258 bp Feature: domain Description: SLH Location: 1 351 1 29-1 351 258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), IME4 (COG4725), SCAD_SBCAD (cd01158), fixB (PRK03363), rubredoxin (cd00730), IscR (TIGR02010), RVT-Retrons
Phage_int_SAM_1 (pfam02899), INT_C_like_2 (cd01191), NosD_copper_fam (TIGR04247), SLH (pfam00395)