myRT

myRT report for GCA_003574235.1_ASM357423v1

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Seq: AP018748.1 Klebsiella pneumoniae KP33 plasmid pKP3301 DNA, complete genome (296750 bp)
Overview 1 RT 1: 142096-143638 bp Neighborhood of RT #1 [142096, 143638] group_II_RT_mat RVT-GII group_II_RT_mat Feature: gene Location: 142096-142674 bp Ori: BBE58741.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 142438-142645 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 42438-1 42645 bp Feature: gene Location: 142691-142870 bp Feature: gene Location: 142941-143141 bp Ori: BBE58743.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142950-143118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 42950-1 431 1 8 bp Feature: gene Location: 143200-143451 bp Ori: BBE58744.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 143257-143446 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 43257-1 43446 bp Feature: gene Location: 143456-143638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII

Seq: AP018747.1 Klebsiella pneumoniae KP33 DNA, complete genome (5256831 bp)
Overview 1 RT 1: 409296-417926 bp 2 RT 2: 1465852-1472323 bp 3 RT 3: 1597984-1600942 bp 4 RT 4: 2881020-2886384 bp Neighborhood of RT #1 [409296, 417931] FimC FimD RVT-UG4 PRK09692 YqgA Neighborhood of RT #2 [1465852, 1472337] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [1597984, 1601136] RVT-GII PRK10276 Neighborhood of RT #4 [2881020, 2886440] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Feature: gene Location: 409296-410060 bp Ori: BBE53841.1 Feature: domain Description: FimC Location: 409341-410043 bp Feature: domain Description: FimC Location: 409341-410043 bp Feature: gene Location: 410107-412701 bp Ori: BBE53842.1 Feature: domain Description: FimD Location: 410149-412690 bp Feature: domain Description: FimD Location: 410149-412 690 bp Feature: gene Location: 412698-414779 bp Ori: BBE53843.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 413109-413553 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 413109-413553 bp Feature: gene Location: 415537-416400 bp Ori: BBE53844.1 Feature: domain Description: PRK09692 Location: 415561-416398 bp Feature: domain Description: PRK09692 Location: 415561-416398 bp Feature: gene Location: 417218-417931 bp Ori: BBE53845.1 Feature: domain Description: YqgA Location: 417224-417926 bp Feature: domain Description: YqgA Location: 4172 2 4-41792 6 bp Feature: gene Location: 1465852-1467276 bp Ori: BBE54867.1 Feature: domain Description: SbcB Location: 1465858-1467274 bp Feature: domain Description: SbcB Location: 1465858-14672 74 bp Feature: gene Location: 1467457-1468620 bp Ori: BBE54868.1 Feature: domain Description: dacD Location: 1467460-1468615 bp Feature: domain Description: dacD Location: 1467460-1468615 bp Feature: gene Location: 1469138-1470625 bp Ori: BBE54869.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1469543-1470233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1469543-14702 33 bp Feature: gene Location: 1470707-1471180 bp Ori: BBE54870.1 Feature: domain Description: PRK10016 Location: 1470710-1471169 bp Feature: domain Description: PRK10016 Location: 1470710-1471169 bp Feature: gene Location: 1471279-1472337 bp Ori: BBE54871.1 Feature: domain Description: YccC Location: 1471285-1472323 bp Feature: domain Description: YccC Location: 14712 85-1472 32 3 bp Feature: gene Location: 1597984-1598313 bp Feature: gene Location: 1598397-1598612 bp Feature: gene Location: 1599015-1600502 bp Ori: BBE55025.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1599420-1600110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159942 0-1600110 bp Feature: gene Location: 1600580-1600819 bp Feature: gene Location: 1600819-1601136 bp Ori: BBE55027.1 Feature: domain Description: PRK10276 Location: 1600825-1600942 bp Feature: domain Description: PRK102 76 Location: 160082 5-1600942 bp Feature: gene Location: 2881020-2882285 bp Ori: BBE56344.1 Feature: domain Description: umuC Location: 2881023-2882283 bp Feature: domain Description: umuC Location: 2 88102 3-2 882 2 83 bp Feature: gene Location: 2882288-2882707 bp Ori: BBE56345.1 Feature: domain Description: PRK10276 Location: 2882291-2882702 bp Feature: domain Description: PRK102 76 Location: 2 882 2 91-2 882 702 bp Feature: gene Location: 2882786-2884273 bp Ori: BBE56346.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2883191-2883881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 883191-2 883881 bp Feature: gene Location: 2884888-2885130 bp Ori: BBE56347.1 Feature: domain Description: DinI Location: 2884939-2885119 bp Feature: domain Description: DinI Location: 2 884939-2 885119 bp Feature: gene Location: 2885301-2886440 bp Ori: BBE56348.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2885484-2886384 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2 885484-2 886384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, PRK09692 (Integrase; provisional), YqgA (COG1811), SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789)

Seq: AP018749.1 Klebsiella pneumoniae KP33 plasmid pKP3302 DNA, complete genome (102910 bp)
Overview 1 RT 1: 93548-97816 bp Neighborhood of RT #1 [93548, 97821] RVT-GII PRK10276 umuC Feature: gene Location: 93548-93706 bp Feature: gene Location: 93771-94118 bp Feature: gene Location: 94235-95722 bp Ori: BBE59086.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94640-95330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94640-953 3 0 bp Feature: gene Location: 96125-96550 bp Ori: BBE59087.1 Feature: domain Description: PRK10276 Location: 96128-96536 bp Feature: domain Description: PRK10276 Location: 96128-9653 6 bp Feature: gene Location: 96550-97821 bp Ori: BBE59088.1 Feature: domain Description: umuC Location: 96553-97816 bp Feature: domain Description: umuC Location: 96553 -97816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)