myRT

myRT report for GCA_003574255.1_ASM357425v1

Download annotations/find similar RTs

Seq: AP018752.1 Klebsiella pneumoniae KP64 plasmid pKP6402 DNA, complete genome (31835 bp)
Overview 1 RT 1: 4169-9194 bp Neighborhood of RT #1 [4169, 9199] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 4169-5440 bp Ori: BBE64642.1 Feature: domain Description: umuC Location: 4172-5432 bp Feature: domain Description: umuC Location: 41 72-5432 bp Feature: gene Location: 5440-5871 bp Ori: BBE64643.1 Feature: domain Description: PRK10276 Location: 5491-5854 bp Feature: domain Description: PRK1 0276 Location: 5491 -5854 bp Feature: gene Location: 6355-7764 bp Ori: BBE64644.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6682-7372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6682-7372 bp Feature: gene Location: 7833-8102 bp Feature: gene Location: 8234-9199 bp Ori: BBE64646.1 Feature: domain Description: ArdC Location: 8360-9194 bp Feature: domain Description: ArdC Location: 8360-91 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: AP018750.1 Klebsiella pneumoniae KP64 DNA, complete genome (5587050 bp)
Overview 1 RT 1: 409314-417944 bp 2 RT 2: 1468389-1474860 bp 3 RT 3: 1666739-1669697 bp 4 RT 4: 2949839-2955203 bp 5 RT 5: 5098351-5103364 bp Neighborhood of RT #1 [409314, 417949] FimC FimD RVT-UG4 PRK09692 YqgA Neighborhood of RT #2 [1468389, 1474874] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [1666739, 1669891] RVT-GII PRK10276 Neighborhood of RT #4 [2949839, 2955259] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #5 [5098351, 5103364] INT_Cre_C RVT-GII HHA Feature: gene Location: 409314-410078 bp Ori: BBE59515.1 Feature: domain Description: FimC Location: 409359-410061 bp Feature: domain Description: FimC Location: 409359-410061 bp Feature: gene Location: 410125-412719 bp Ori: BBE59516.1 Feature: domain Description: FimD Location: 410167-412708 bp Feature: domain Description: FimD Location: 410167-412 708 bp Feature: gene Location: 412716-414797 bp Ori: BBE59517.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 413127-413571 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 41312 7-413571 bp Feature: gene Location: 415555-416418 bp Ori: BBE59518.1 Feature: domain Description: PRK09692 Location: 415579-416416 bp Feature: domain Description: PRK09692 Location: 415579-416416 bp Feature: gene Location: 417236-417949 bp Ori: BBE59519.1 Feature: domain Description: YqgA Location: 417242-417944 bp Feature: domain Description: YqgA Location: 4172 42 -417944 bp Feature: gene Location: 1468389-1469813 bp Ori: BBE60522.1 Feature: domain Description: SbcB Location: 1468395-1469811 bp Feature: domain Description: SbcB Location: 1468395-1469811 bp Feature: gene Location: 1469994-1471157 bp Ori: BBE60523.1 Feature: domain Description: dacD Location: 1469997-1471152 bp Feature: domain Description: dacD Location: 1469997-1471152 bp Feature: gene Location: 1471678-1473162 bp Ori: BBE60524.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1472080-1472770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1472 080-1472 770 bp Feature: gene Location: 1473244-1473717 bp Ori: BBE60525.1 Feature: domain Description: PRK10016 Location: 1473247-1473706 bp Feature: domain Description: PRK10016 Location: 14732 47-1473706 bp Feature: gene Location: 1473816-1474874 bp Ori: BBE60526.1 Feature: domain Description: YccC Location: 1473822-1474860 bp Feature: domain Description: YccC Location: 147382 2 -1474860 bp Feature: gene Location: 1666739-1667068 bp Feature: gene Location: 1667152-1667367 bp Feature: gene Location: 1667773-1669257 bp Ori: BBE60717.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1668175-1668865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1668175-1668865 bp Feature: gene Location: 1669335-1669574 bp Feature: gene Location: 1669574-1669891 bp Ori: BBE60719.1 Feature: domain Description: PRK10276 Location: 1669580-1669697 bp Feature: domain Description: PRK102 76 Location: 1669580-1669697 bp Feature: gene Location: 2949839-2951104 bp Ori: BBE62025.1 Feature: domain Description: umuC Location: 2949842-2951102 bp Feature: domain Description: umuC Location: 2 949842 -2 951102 bp Feature: gene Location: 2951107-2951526 bp Ori: BBE62026.1 Feature: domain Description: PRK10276 Location: 2951110-2951521 bp Feature: domain Description: PRK102 76 Location: 2 951110-2 95152 1 bp Feature: gene Location: 2951605-2953089 bp Ori: BBE62027.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2952007-2952697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 952 007-2 952 697 bp Feature: gene Location: 2953707-2953949 bp Ori: BBE62028.1 Feature: domain Description: DinI Location: 2953758-2953938 bp Feature: domain Description: DinI Location: 2 953758-2 953938 bp Feature: gene Location: 2954120-2955259 bp Ori: BBE62029.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2954303-2955203 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2 954303-2 9552 03 bp Feature: gene Location: 5098351-5098668 bp Feature: gene Location: 5098734-5099870 bp Ori: BBE64037.1 Feature: domain Description: INT_Cre_C Location: 5099157-5099811 bp Feature: domain Description: INT_Cre_C Location: 5099157-5099811 bp Feature: gene Location: 5099956-5101440 bp Ori: BBE64038.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5100358-5101048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5100358-5101048 bp Feature: gene Location: 5101957-5102211 bp Ori: BBE64039.1 Feature: domain Description: HHA Location: 5102008-5102191 bp Feature: domain Description: HHA Location: 5102 008-5102 191 bp Feature: gene Location: 5102297-5103364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, PRK09692 (Integrase; provisional), YqgA (COG1811), SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), INT_Cre_C (cd00799), HHA (pfam05321)

Seq: AP018751.1 Klebsiella pneumoniae KP64 plasmid pKP6401 DNA, complete genome (102903 bp)
Overview 1 RT 1: 92530-97058 bp Neighborhood of RT #1 [92530, 97063] RVT-GII PRK10276 umuC Feature: gene Location: 92530-92751 bp Feature: gene Location: 93013-93360 bp Feature: gene Location: 93477-94964 bp Ori: BBE64627.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93882-94572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 882-94572 bp Feature: gene Location: 95367-95792 bp Ori: BBE64628.1 Feature: domain Description: PRK10276 Location: 95370-95778 bp Feature: domain Description: PRK10276 Location: 953 70-95778 bp Feature: gene Location: 95792-97063 bp Ori: BBE64629.1 Feature: domain Description: umuC Location: 95795-97058 bp Feature: domain Description: umuC Location: 95795-97058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)