myRT

myRT report for GCA_003574275.1_ASM357427v1

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Seq: AP018754.1 Klebsiella pneumoniae KP67 plasmid pKP6701 DNA, complete genome (102917 bp)
Overview 1 RT 1: 92544-97072 bp Neighborhood of RT #1 [92544, 97077] RVT-GII PRK10276 umuC Feature: gene Location: 92544-92765 bp Feature: gene Location: 93027-93257 bp Feature: gene Location: 93491-94978 bp Ori: BBE70207.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93896-94586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93896-94586 bp Feature: gene Location: 95381-95806 bp Ori: BBE70208.1 Feature: domain Description: PRK10276 Location: 95384-95792 bp Feature: domain Description: PRK1 0276 Location: 95384-95792 bp Feature: gene Location: 95806-97077 bp Ori: BBE70209.1 Feature: domain Description: umuC Location: 95809-97072 bp Feature: domain Description: umuC Location: 95809-97072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: AP018755.1 Klebsiella pneumoniae KP67 plasmid pKP6702 DNA, complete genome (31833 bp)
Overview 1 RT 1: 4130-9155 bp Neighborhood of RT #1 [4130, 9160] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 4130-5401 bp Ori: BBE70224.1 Feature: domain Description: umuC Location: 4133-5393 bp Feature: domain Description: umuC Location: 4133-5393 bp Feature: gene Location: 5401-5832 bp Ori: BBE70225.1 Feature: domain Description: PRK10276 Location: 5452-5815 bp Feature: domain Description: PRK102 76 Location: 5452 -5815 bp Feature: gene Location: 6241-7725 bp Ori: BBE70226.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6643-7333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6643-7333 bp Feature: gene Location: 7718-7987 bp Feature: gene Location: 8195-9160 bp Ori: BBE70228.1 Feature: domain Description: ArdC Location: 8321-9155 bp Feature: domain Description: ArdC Location: 832 1-9155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: AP018753.1 Klebsiella pneumoniae KP67 DNA, complete genome (5587048 bp)
Overview 1 RT 1: 409314-417944 bp 2 RT 2: 1468388-1474859 bp 3 RT 3: 1666738-1669696 bp 4 RT 4: 2949837-2955201 bp 5 RT 5: 5098349-5103362 bp Neighborhood of RT #1 [409314, 417949] FimC FimD RVT-UG4 PRK09692 YqgA Neighborhood of RT #2 [1468388, 1474873] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [1666738, 1669890] RVT-GII PRK10276 Neighborhood of RT #4 [2949837, 2955257] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #5 [5098349, 5103362] INT_Cre_C RVT-GII HHA Feature: gene Location: 409314-410078 bp Ori: BBE65106.1 Feature: domain Description: FimC Location: 409359-410061 bp Feature: domain Description: FimC Location: 4093 59-410061 bp Feature: gene Location: 410125-412719 bp Ori: BBE65107.1 Feature: domain Description: FimD Location: 410167-412708 bp Feature: domain Description: FimD Location: 410167-412708 bp Feature: gene Location: 412716-414797 bp Ori: BBE65108.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 413127-413571 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 413 127-413 571 bp Feature: gene Location: 415555-416418 bp Ori: BBE65109.1 Feature: domain Description: PRK09692 Location: 415579-416416 bp Feature: domain Description: PRK09692 Location: 415579-416416 bp Feature: gene Location: 417236-417949 bp Ori: BBE65110.1 Feature: domain Description: YqgA Location: 417242-417944 bp Feature: domain Description: YqgA Location: 417242-417944 bp Feature: gene Location: 1468388-1469812 bp Ori: BBE66112.1 Feature: domain Description: SbcB Location: 1468394-1469810 bp Feature: domain Description: SbcB Location: 14683 94-1469810 bp Feature: gene Location: 1469993-1471156 bp Ori: BBE66113.1 Feature: domain Description: dacD Location: 1469996-1471151 bp Feature: domain Description: dacD Location: 1469996-1471151 bp Feature: gene Location: 1471674-1473161 bp Ori: BBE66114.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1472079-1472769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1472079-1472769 bp Feature: gene Location: 1473243-1473716 bp Ori: BBE66115.1 Feature: domain Description: PRK10016 Location: 1473246-1473705 bp Feature: domain Description: PRK10016 Location: 1473 246-1473 705 bp Feature: gene Location: 1473815-1474873 bp Ori: BBE66116.1 Feature: domain Description: YccC Location: 1473821-1474859 bp Feature: domain Description: YccC Location: 1473 821-1474859 bp Feature: gene Location: 1666738-1667067 bp Feature: gene Location: 1667151-1667366 bp Feature: gene Location: 1667769-1669256 bp Ori: BBE66307.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1668174-1668864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1668174-1668864 bp Feature: gene Location: 1669334-1669573 bp Feature: gene Location: 1669573-1669890 bp Ori: BBE66309.1 Feature: domain Description: PRK10276 Location: 1669579-1669696 bp Feature: domain Description: PRK10276 Location: 1669579-1669696 bp Feature: gene Location: 2949837-2951102 bp Ori: BBE67615.1 Feature: domain Description: umuC Location: 2949840-2951100 bp Feature: domain Description: umuC Location: 2949840-2951100 bp Feature: gene Location: 2951105-2951524 bp Ori: BBE67616.1 Feature: domain Description: PRK10276 Location: 2951108-2951519 bp Feature: domain Description: PRK10276 Location: 2951108-2951519 bp Feature: gene Location: 2951603-2953090 bp Ori: BBE67617.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2952008-2952698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2952008-2952698 bp Feature: gene Location: 2953705-2953947 bp Ori: BBE67618.1 Feature: domain Description: DinI Location: 2953756-2953936 bp Feature: domain Description: DinI Location: 2953 756-2953 93 6 bp Feature: gene Location: 2954118-2955257 bp Ori: BBE67619.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2954301-2955201 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 29543 01-2955201 bp Feature: gene Location: 5098349-5098666 bp Feature: gene Location: 5098732-5099868 bp Ori: BBE69623.1 Feature: domain Description: INT_Cre_C Location: 5099155-5099809 bp Feature: domain Description: INT_Cre_C Location: 5099155-5099809 bp Feature: gene Location: 5099954-5101441 bp Ori: BBE69624.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5100359-5101049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51003 59-5101049 bp Feature: gene Location: 5101955-5102209 bp Ori: BBE69625.1 Feature: domain Description: HHA Location: 5102006-5102189 bp Feature: domain Description: HHA Location: 5102006-5102189 bp Feature: gene Location: 5102295-5103362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, PRK09692 (Integrase; provisional), YqgA (COG1811), SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), INT_Cre_C (cd00799), HHA (pfam05321)