myRT

myRT report for GCA_003586485.1_ASM358648v1

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Seq: CP031319.1 Lactobacillus plantarum strain DR7 plasmid unnamed1, complete sequence (32875 bp)
Overview 1 RT 1: 9924-13511 bp Neighborhood of RT #1 [9924, 13511] 2a45 DDE_Tnp_Tn3 RVT-GII GIIM PRK09564 Feature: gene Location: 9924-10031 bp Feature: domain Description: 2a45 Location: 9927-10023 bp Feature: domain Description: 2a45 Location: 9927-1 0023 bp Feature: gene Location: 10087-10428 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 10093-10360 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1 0093-1 0360 bp Feature: gene Location: 10592-11494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10607-11048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0607-1 1 048 bp Feature: domain Description: GIIM Note: maturase Location: 11102-11330 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 02-1 1 330 bp Feature: gene Location: 11629-12993 bp Ori: AYA81789.1 Feature: domain Description: PRK09564 Location: 11644-12967 bp Feature: domain Description: PRK09564 Location: 1 1 644-1 2967 bp Feature: gene Location: 13125-13511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2a45 (TIGR00935), DDE_Tnp_Tn3 (pfam01526), RVT-GII, GIIM (pfam08388), PRK09564 (coenzyme A disulfide reductase; Reviewed)

Seq: CP031318.1 Lactobacillus plantarum strain DR7 chromosome, complete genome (3197744 bp)
Overview 1 RT 1: 1993500-1997961 bp Neighborhood of RT #1 [1993500, 1997969] Phage_int_SAM_5 INT_ICEBs1_C_like RVT-Retrons gpmA Feature: gene Location: 1993500-1994630 bp Ori: AYA80612.1 Feature: domain Description: Phage_int_SAM_5 Location: 1993689-1993947 bp Feature: domain Description: Phage_int_SAM_5 Location: 1993689-1993947 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1994067-1994568 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1994067-1994568 bp Feature: gene Location: 1995180-1995527 bp Feature: gene Location: 1995464-1996408 bp Ori: AYA80614.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1995593-1996139 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1995593-1996139 bp Feature: gene Location: 1996514-1997464 bp Feature: gene Location: 1997757-1997969 bp Feature: domain Description: gpmA Location: 1997760-1997961 bp Feature: domain Description: gpmA Location: 1997760-1997961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_5 (pfam13102), INT_ICEBs1_C_like (cd01189), RVT-Retrons, gpmA (PRK14120)