myRT

myRT report for GCA_003589745.1_ASM358974v1

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Seq: CP032364.1 Lachnoanaerobaculum umeaense strain DSM 23576 = CCUG 58757 chromosome, complete genome (2810441 bp)
Overview 1 RT 1: 1536682-1545631 bp Neighborhood of RT #1 [1536682, 1545666] KOG2994 Cas2_I_II_III RVT-CRISPR cas1_HMARI Cas_DxTHG COG3666 DDE_Tnp_1_6 Feature: gene Location: 1536682-1537359 bp Ori: AYA99693.1 Feature: domain Description: KOG2994 Location: 1536700-1537345 bp Feature: domain Description: KOG2994 Location: 1 536700-1 537345 bp Feature: gene Location: 1538606-1538866 bp Ori: AYA99694.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 1538615-1538843 bp Feature: domain Description: Cas2_I_II_III Location: 1 53861 5-1 538843 bp Feature: gene Location: 1538875-1540794 bp Ori: AYA99695.1 Gene: cas1b Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1539091-1539679 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 539091 -1 539679 bp Feature: domain Description: cas1_HMARI Location: 1539808-1540786 bp Feature: domain Description: cas1 _HMARI Location: 1 539808-1 540786 bp Feature: gene Location: 1540908-1542413 bp Ori: AYB00826.1 Feature: domain Description: Cas_DxTHG Location: 1541007-1542330 bp Feature: domain Description: Cas_DxTHG Location: 1 541 007-1 542330 bp Feature: gene Location: 1544092-1545666 bp Ori: AYA99696.1 Feature: domain Description: COG3666 Location: 1544197-1544587 bp Feature: domain Description: COG3666 Location: 1 5441 97-1 544587 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1545262-1545631 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 545262-1 545631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG2994 (KOG2994, Uracil DNA glycosylase ), Cas2_I_II_III (cl11442), RVT-CRISPR, cas1_HMARI (TIGR03641), Cas_DxTHG (pfam09455), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)