myRT

myRT report for GCA_003590055.1_ASM359005v1

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Seq: CP032413.1 Paenibacillus lautus strain E7593-69 plasmid pAZOPL1, complete sequence (226451 bp)
Overview 1 RT 1: 7795-13583 bp 2 RT 2: 77674-83559 bp Neighborhood of RT #1 [7795, 13792] PRTRC_A E1_enzyme_family RVT-GII Intron_maturas2 HNHc PAPS_reductase Neighborhood of RT #2 [77674, 83559] NlpD FlgJ RVT-GII HNHc DUF4258 Feature: gene Location: 7795-9228 bp Ori: AYB47999.1 Feature: domain Description: PRTRC_A Location: 8737-9064 bp Feature: domain Description: PRTRC_A Location: 8737-9064 bp Feature: gene Location: 9245-9652 bp Ori: AYB48000.1 Feature: domain Description: E1_enzyme_family Location: 9299-9557 bp Feature: domain Description: E1 _enzyme_family Location: 9299-9557 bp Feature: gene Location: 10276-12096 bp Ori: AYB48001.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10540-11362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0540-1 1 362 bp Feature: domain Description: Intron_maturas2 Location: 11431-11728 bp Feature: domain Description: Intron_maturas2 Location: 1 1 431 -1 1 728 bp Feature: domain Description: HNHc Note: nucleases Location: 11905-12052 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 905-1 2052 bp Feature: gene Location: 12174-12677 bp Feature: gene Location: 12971-13792 bp Ori: AYB48003.1 Feature: domain Description: PAPS_reductase Location: 13058-13583 bp Feature: domain Description: PAPS_reductase Location: 1 3058-1 3583 bp Feature: gene Location: 77674-79452 bp Ori: AYB48185.1 Feature: domain Description: NlpD Location: 77884-78289 bp Feature: domain Description: NlpD Location: 77884-78289 bp Feature: domain Description: FlgJ Location: 78562-79018 bp Feature: domain Description: FlgJ Location: 78562-7901 8 bp Feature: gene Location: 79452-79850 bp Feature: gene Location: 80841-82724 bp Ori: AYB48052.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81159-81867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 1 59-81 867 bp Feature: domain Description: HNHc Note: nucleases Location: 82479-82644 bp Feature: domain Description: HNHc Note: nucleases Location: 82479-82644 bp Feature: gene Location: 82909-83220 bp Ori: AYB48053.1 Feature: domain Description: DUF4258 Location: 82963-83179 bp Feature: domain Description: DUF4258 Location: 82963-831 79 bp Feature: gene Location: 83284-83559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRTRC_A (TIGR03735), E1_enzyme_family (cl22428), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PAPS_reductase (TIGR02057), NlpD (COG0739), FlgJ (COG1705), DUF4258 (pfam14076)