myRT

myRT report for GCA_003590565.1_ASM359056v1

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Seq: CP023642.1 Flavobacterium anhuiense strain M168 chromosome, complete genome (5377387 bp)
Overview 1 RT 1: 161483-164684 bp 2 RT 2: 2233513-2238386 bp 3 RT 3: 3835976-3839583 bp Neighborhood of RT #1 [161483, 164737] HTH_XRE RVT-Retrons COG4933 sufD Neighborhood of RT #2 [2233513, 2238386] osmo_induc_OsmC RVT-UG2 Neighborhood of RT #3 [3835976, 3839583] RVT-DGRs Feature: gene Location: 161483-161716 bp Feature: gene Location: 161778-162068 bp Feature: domain Description: HTH_XRE Location: 161790-161952 bp Feature: domain Description: HTH_XRE Location: 1 61 790-1 61 952 bp Feature: gene Location: 162133-162927 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 162232-162745 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 62232-1 62745 bp Feature: gene Location: 162946-163323 bp Feature: domain Description: COG4933 Location: 162961-163309 bp Feature: domain Description: COG4933 Location: 1 62961 -1 63309 bp Feature: gene Location: 163421-164737 bp Feature: domain Description: sufD Location: 163865-164684 bp Feature: domain Description: sufD Location: 1 63865-1 64684 bp Feature: gene Location: 2233513-2233929 bp Feature: domain Description: osmo_induc_OsmC Location: 2233528-2233912 bp Feature: domain Description: osmo_induc_OsmC Location: 2233528-223391 2 bp Feature: gene Location: 2234168-2235541 bp Feature: gene Location: 2235969-2237585 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2236221-2237166 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2236221 -22371 66 bp Feature: gene Location: 2237623-2237913 bp Feature: gene Location: 2238153-2238386 bp Feature: gene Location: 3835976-3836728 bp Feature: gene Location: 3836732-3837022 bp Feature: gene Location: 3837319-3838281 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3837529-3838117 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3837529-38381 1 7 bp Feature: gene Location: 3838495-3838983 bp Feature: gene Location: 3838996-3839583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, COG4933 (Predicted transcriptional regulator, contains an HTH and PUA-like domains ), sufD (TIGR01981), osmo_induc_OsmC (TIGR03562), RVT-UG2, RVT-DGRs