myRT

myRT report for GCA_003590665.1_ASM359066v1

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Seq: CP031818.1 Klebsiella pneumoniae strain INF235-sc-2280127 plasmid unnamed1, complete sequence (430829 bp)
Overview 1 RT 1: 220601-224829 bp 2 RT 2: 256384-259934 bp 3 RT 3: 425500-429341 bp Neighborhood of RT #1 [220601, 224885] umuC PRK10276 RVT-GII cas7_csf2 Neighborhood of RT #2 [256384, 260467] InsE PHA02517 RVT-GII GIIM DDE_Tnp_1_5 Neighborhood of RT #3 [425500, 429361] INT_Cre_C RVT-GII HHA Feature: gene Location: 220601-220702 bp Feature: domain Description: umuC Location: 220604-220703 bp Feature: domain Description: umuC Location: 220604-220703 bp Feature: gene Location: 220702-221124 bp Ori: AYB68625.1 Feature: domain Description: PRK10276 Location: 220708-221110 bp Feature: domain Description: PRK1 0276 Location: 220708-221 1 1 0 bp Feature: gene Location: 221209-222693 bp Ori: AYB68626.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221611-222301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 61 1 -222301 bp Feature: gene Location: 222693-222944 bp Feature: gene Location: 224094-224885 bp Ori: AYB68628.1 Feature: domain Description: cas7_csf2 Location: 224415-224829 bp Feature: domain Description: cas7_csf2 Location: 22441 5-224829 bp Feature: gene Location: 256384-256689 bp Ori: AYB68661.1 Feature: domain Description: InsE Location: 256393-256663 bp Feature: domain Description: InsE Location: 256393-256663 bp Feature: gene Location: 256815-257087 bp Ori: AYB68662.1 Feature: domain Description: PHA02517 Location: 256821-257070 bp Feature: domain Description: PHA0251 7 Location: 256821 -257070 bp Feature: gene Location: 257730-259250 bp Ori: AYB68663.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258003-258732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258003-258732 bp Feature: domain Description: GIIM Note: maturase Location: 258804-259005 bp Feature: domain Description: GIIM Note: maturase Location: 258804-259005 bp Feature: gene Location: 259463-259555 bp Feature: gene Location: 259544-260467 bp Ori: AYB68664.1 Feature: domain Description: DDE_Tnp_1_5 Location: 259601-259934 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 259601 -259934 bp Feature: gene Location: 425500-425817 bp Feature: gene Location: 425883-427019 bp Ori: AYB68801.1 Feature: domain Description: INT_Cre_C Location: 426306-426960 bp Feature: domain Description: INT_Cre_C Location: 426306-426960 bp Feature: gene Location: 427105-428589 bp Ori: AYB68802.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427507-428197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427507-4281 97 bp Feature: gene Location: 428589-428840 bp Feature: gene Location: 429107-429361 bp Ori: AYB68804.1 Feature: domain Description: HHA Location: 429158-429341 bp Feature: domain Description: HHA Location: 4291 58-429341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, cas7_csf2 (TIGR03115), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), DDE_Tnp_1_5 (pfam13737), INT_Cre_C (cd00799), HHA (pfam05321)