myRT

myRT report for GCA_003597595.1_ASM359759v1

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Seq: CP032464.1 Lactobacillus plantarum strain ATG-K6 chromosome, complete genome (3205672 bp)
Overview 1 RT 1: 142988-147449 bp Neighborhood of RT #1 [142988, 147457] Phage_int_SAM_5 INT_ICEBs1_C_like RVT-Retrons gpmA Feature: gene Location: 142988-144118 bp Ori: AYC73497.1 Feature: domain Description: Phage_int_SAM_5 Location: 143177-143435 bp Feature: domain Description: Phage_int_SAM_5 Location: 1 431 77-1 43435 bp Feature: domain Description: INT_ICEBs1_C_like Location: 143555-144056 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 43555-1 44056 bp Feature: gene Location: 144668-145015 bp Feature: gene Location: 144952-145896 bp Ori: AYC73499.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 145081-145627 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 45081 -1 45627 bp Feature: gene Location: 146002-146952 bp Feature: gene Location: 147245-147457 bp Feature: domain Description: gpmA Location: 147248-147449 bp Feature: domain Description: gpmA Location: 1 47248-1 47449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_5 (pfam13102), INT_ICEBs1_C_like (cd01189), RVT-Retrons, gpmA (PRK14120)

Seq: CP032465.1 Lactobacillus plantarum strain ATG-K6 plasmid pK6, complete sequence (56833 bp)
Overview 1 RT 1: 22727-26276 bp Neighborhood of RT #1 [22727, 26284] PRK09564 RVT-GII GIIM DDE_Tnp_Tn3 2a45 Feature: gene Location: 22727-23113 bp Feature: gene Location: 23245-24609 bp Ori: AYC76331.1 Feature: domain Description: PRK09564 Location: 23260-24583 bp Feature: domain Description: PRK09564 Location: 2 32 60-2 4583 bp Feature: gene Location: 24744-25646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24759-25200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4759-2 52 00 bp Feature: domain Description: GIIM Note: maturase Location: 25254-25482 bp Feature: domain Description: GIIM Note: maturase Location: 2 52 54-2 5482 bp Feature: gene Location: 25810-26151 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 25816-26083 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 2 5816-2 6083 bp Feature: gene Location: 26207-26284 bp Ori: AYC76363.1 Feature: domain Description: 2a45 Location: 26210-26276 bp Feature: domain Description: 2 a45 Location: 2 62 10-2 62 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09564 (coenzyme A disulfide reductase; Reviewed), RVT-GII, GIIM (pfam08388), DDE_Tnp_Tn3 (pfam01526), 2a45 (TIGR00935)