myRT

myRT report for GCA_003597615.1_ASM359761v1

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Seq: CP032467.1 Lactobacillus plantarum strain ATG-K8 plasmid pK8, complete sequence (54492 bp)
Overview 1 RT 1: 26481-30068 bp Neighborhood of RT #1 [26481, 30068] 2a45 DDE_Tnp_Tn3 RVT-GII GIIM PRK09564 Feature: gene Location: 26481-26588 bp Feature: domain Description: 2a45 Location: 26484-26580 bp Feature: domain Description: 2a45 Location: 26484-26580 bp Feature: gene Location: 26644-26985 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 26650-26917 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 26650-2691 7 bp Feature: gene Location: 27149-28051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27164-27605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271 64-27605 bp Feature: domain Description: GIIM Note: maturase Location: 27659-27887 bp Feature: domain Description: GIIM Note: maturase Location: 27659-27887 bp Feature: gene Location: 28186-29550 bp Ori: AYC70481.1 Feature: domain Description: PRK09564 Location: 28201-29524 bp Feature: domain Description: PRK09564 Location: 28201 -29524 bp Feature: gene Location: 29682-30068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2a45 (TIGR00935), DDE_Tnp_Tn3 (pfam01526), RVT-GII, GIIM (pfam08388), PRK09564 (coenzyme A disulfide reductase; Reviewed)

Seq: CP032466.1 Lactobacillus plantarum strain ATG-K8 chromosome, complete genome (3221272 bp)
Overview 1 RT 1: 2714986-2719447 bp Neighborhood of RT #1 [2714986, 2719455] Phage_int_SAM_5 INT_ICEBs1_C_like RVT-Retrons gpmA Feature: gene Location: 2714986-2716116 bp Ori: AYC69948.1 Feature: domain Description: Phage_int_SAM_5 Location: 2715175-2715433 bp Feature: domain Description: Phage_int_SAM_5 Location: 2 715175-2 715433 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2715553-2716054 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2 715553-2 716054 bp Feature: gene Location: 2716666-2717013 bp Feature: gene Location: 2716950-2717894 bp Ori: AYC69950.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2717079-2717625 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 717079-2 71762 5 bp Feature: gene Location: 2718000-2718950 bp Feature: gene Location: 2719243-2719455 bp Feature: domain Description: gpmA Location: 2719246-2719447 bp Feature: domain Description: gpmA Location: 2 7192 46-2 719447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_5 (pfam13102), INT_ICEBs1_C_like (cd01189), RVT-Retrons, gpmA (PRK14120)