myRT

myRT report for GCA_003606245.1_ASM360624v1

Download annotations/find similar RTs

Seq: CP023776.1 Burkholderia pseudomallei strain BPHN1 chromosome 2, complete sequence (3217986 bp)
Overview 1 RT 1: 1492947-1497820 bp 2 RT 2: 3088861-3094578 bp Neighborhood of RT #1 [1492947, 1497861] TrxB RVT-GII GIIM LysR Neighborhood of RT #2 [3088861, 3094578] Tra5 RVT-GII GIIM InsE Feature: gene Location: 1492947-1493858 bp Ori: AYE31211.1 Feature: domain Description: TrxB Location: 1492956-1493832 bp Feature: domain Description: TrxB Location: 1 492956-1 493832 bp Feature: gene Location: 1493834-1494058 bp Feature: gene Location: 1494724-1496241 bp Ori: AYE31212.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1494982-1495720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 494982-1 495720 bp Feature: domain Description: GIIM Note: maturase Location: 1495831-1496002 bp Feature: domain Description: GIIM Note: maturase Location: 1 495831 -1 496002 bp Feature: gene Location: 1496358-1496477 bp Feature: gene Location: 1496926-1497861 bp Ori: AYE32757.1 Feature: domain Description: LysR Location: 1496947-1497820 bp Feature: domain Description: LysR Location: 1 496947-1 497820 bp Feature: gene Location: 3088861-3089259 bp Feature: gene Location: 3089347-3089781 bp Ori: AYE32480.1 Feature: domain Description: Tra5 Location: 3089353-3089746 bp Feature: domain Description: Tra5 Location: 3089353-3089746 bp Feature: gene Location: 3089902-3091419 bp Ori: AYE32481.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3090160-3090898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30901 60-3090898 bp Feature: domain Description: GIIM Note: maturase Location: 3091009-3091180 bp Feature: domain Description: GIIM Note: maturase Location: 3091 009-3091 1 80 bp Feature: gene Location: 3092100-3092800 bp Feature: domain Description: InsE Location: 3092124-3092394 bp Feature: domain Description: InsE Location: 30921 24-3092394 bp Feature: gene Location: 3093427-3094578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrxB (COG0492), RVT-GII, GIIM (pfam08388), LysR (COG0583), Tra5 (COG2801), InsE (COG2963)