myRT

myRT report for GCA_003609695.1_ASM360969v1

Download annotations/find similar RTs

Seq: AP018496.1 Mycobacterium marinum ATCC 927 DNA, complete genome (6451936 bp)
Overview 1 RT 1: 4125551-4131386 bp 2 RT 2: 5266981-5277498 bp Neighborhood of RT #1 [4125551, 4131487] YHI9 RVT-CRISPR-like RnaI Neighborhood of RT #2 [5266981, 5277509] InsE PHA02517 RVT-GII GIIM PHA02517 HTH_23 COG4584 PHA02517 INT_ICEBs1_C_like RVT-UG26 HTH_32 rve PE PE_PPE_C Feature: gene Location: 4125551-4125967 bp Feature: gene Location: 4126047-4126889 bp Ori: BBC66820.1 Feature: domain Description: YHI9 Location: 4126059-4126881 bp Feature: domain Description: YHI9 Location: 41 26059-41 26881 bp Feature: gene Location: 4127126-4128457 bp Ori: BBC66821.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4127366-4127987 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 41 27366-41 27987 bp Feature: gene Location: 4128450-4130585 bp Feature: gene Location: 4130705-4131487 bp Ori: BBC66823.1 Feature: domain Description: RnaI Location: 4130807-4131386 bp Feature: domain Description: RnaI Location: 41 30807-41 31 386 bp Feature: gene Location: 5266981-5267274 bp Ori: BBC67876.1 Feature: domain Description: InsE Location: 5266990-5267257 bp Feature: domain Description: InsE Location: 5266990-5267257 bp Feature: gene Location: 5267271-5267744 bp Ori: BBC67877.1 Feature: domain Description: PHA02517 Location: 5267340-5267670 bp Feature: domain Description: PHA0251 7 Location: 5267340-5267670 bp Feature: gene Location: 5268276-5269724 bp Ori: BBC67878.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5268594-5269281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5268594-5269281 bp Feature: domain Description: GIIM Note: maturase Location: 5269356-5269551 bp Feature: domain Description: GIIM Note: maturase Location: 5269356-5269551 bp Feature: gene Location: 5269682-5270008 bp Ori: BBC67879.1 Feature: domain Description: PHA02517 Location: 5269847-5269985 bp Feature: domain Description: PHA0251 7 Location: 5269847-5269985 bp Feature: gene Location: 5270150-5271667 bp Ori: BBC67880.1 Feature: domain Description: HTH_23 Location: 5270156-5270291 bp Feature: domain Description: HTH_23 Location: 52701 56-5270291 bp Feature: domain Description: COG4584 Location: 5270423-5271014 bp Feature: domain Description: COG4584 Location: 5270423-5271 01 4 bp Feature: gene Location: 5272628-5272873 bp Ori: BBC67882.1 Feature: domain Description: PHA02517 Location: 5272637-5272853 bp Feature: domain Description: PHA0251 7 Location: 5272637-5272853 bp Feature: gene Location: 5272890-5273243 bp Ori: BBC67883.1 Feature: domain Description: INT_ICEBs1_C_like Location: 5272962-5273145 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 5272962-52731 45 bp Feature: gene Location: 5273286-5274188 bp Ori: BBC67884.1 Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 5273292-5273418 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 5273292-527341 8 bp Feature: gene Location: 5275164-5276135 bp Ori: BBC67885.1 Feature: domain Description: HTH_32 Location: 5275284-5275503 bp Feature: domain Description: HTH_32 Location: 5275284-5275503 bp Feature: domain Description: rve Location: 5275584-5275968 bp Feature: domain Description: rve Location: 5275584-5275968 bp Feature: gene Location: 5276685-5277509 bp Ori: BBC67886.1 Gene: PE8 Feature: domain Description: PE Location: 5276688-5276961 bp Feature: domain Description: PE Location: 5276688-5276961 bp Feature: domain Description: PE_PPE_C Location: 5277258-5277498 bp Feature: domain Description: PE_PPE_C Location: 5277258-5277498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YHI9 (COG0384), RVT-CRISPR, RnaI (COG3719), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_23 (pfam13384), COG4584 (Transposase ), INT_ICEBs1_C_like (cd01189)
RVT-UG26, HTH_32 (pfam13565), rve (pfam00665), PE (pfam00934), PE_PPE_C (pfam12484)