myRT

myRT report for GCA_003609835.1_ASM360983v1

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Seq: AP017898.1 Sphingopyxis sp. FD7 DNA, complete genome (3695614 bp)
Overview 1 RT 1: 3623158-3626875 bp Neighborhood of RT #1 [3623158, 3626875] McrA HTH_XRE RVT-Retrons DUF2285 Feature: gene Location: 3623158-3624015 bp Ori: BBB14253.1 Feature: domain Description: McrA Location: 3623389-3623575 bp Feature: domain Description: McrA Location: 3623389-3623575 bp Feature: gene Location: 3624645-3624944 bp Ori: BBB14254.1 Feature: domain Description: HTH_XRE Location: 3624657-3624822 bp Feature: domain Description: HTH_XRE Location: 3624657-3624822 bp Feature: gene Location: 3624931-3625977 bp Ori: BBB14255.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3625111-3625624 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36251 1 1 -3625624 bp Feature: gene Location: 3626119-3626445 bp Ori: BBB14256.1 Feature: domain Description: DUF2285 Location: 3626128-3626434 bp Feature: domain Description: DUF2285 Location: 36261 28-3626434 bp Feature: gene Location: 3626657-3626875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), HTH_XRE (smart00530), RVT-Retrons, DUF2285 (pfam10074)

Seq: AP017899.1 Sphingopyxis sp. FD7 plasmid pSFD01 DNA, complete sequence (242612 bp)
Overview 1 RT 1: 6019-10407 bp Neighborhood of RT #1 [6019, 10407] Peptidase_S41_TRI Rve RVT-GII Intron_maturas2 Feature: gene Location: 6019-6732 bp Ori: BBB14324.1 Feature: domain Description: Peptidase_S41_TRI Location: 6049-6634 bp Feature: domain Description: Peptidase_S41_TRI Location: 6049-6634 bp Feature: gene Location: 6876-7640 bp Ori: BBB14325.1 Feature: domain Description: Rve Location: 6882-7515 bp Feature: domain Description: Rve Location: 6882 -7515 bp Feature: gene Location: 7901-9823 bp Ori: BBB14326.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8168-9005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8168-9005 bp Feature: domain Description: Intron_maturas2 Location: 9137-9377 bp Feature: domain Description: Intron_maturas2 Location: 9137-9377 bp Feature: gene Location: 9856-10191 bp Feature: gene Location: 10207-10407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S41_TRI (cd07562), Rve (COG3316), RVT-GII, Intron_maturas2 (pfam01348)