myRT

myRT report for GCA_003609855.1_ASM360985v1

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Seq: AP017922.1 Staphylococcus aureus DNA, complete genome, strain: JP080 (2729352 bp)
Overview 1 RT 1: 728527-737749 bp 2 RT 2: 1145930-1153215 bp 3 RT 3: 2211034-2216115 bp 4 RT 4: 2680158-2686194 bp Neighborhood of RT #1 [728527, 737763] DUR1B MdoB RVT-GII GIIM Uup ABC_tran_CTD recQ Neighborhood of RT #2 [1145930, 1153223] PRK05579 PriA RVT-GII GIIM TM2 Neighborhood of RT #3 [2211034, 2216138] eMpr ADPrib_exo_Tox RVT-AbiK HAD_SPP MAP Neighborhood of RT #4 [2680158, 2686208] eps_fam YveK RVT-GII GIIM TetR_N TetR_C_37 PgaC_IcaA Feature: gene Location: 728527-729531 bp Ori: BBA23369.1 Feature: domain Description: DUR1B Location: 728539-729502 bp Feature: domain Description: DUR1 B Location: 728539-729502 bp Feature: gene Location: 730005-731945 bp Ori: BBA23370.1 Gene: ltaS Feature: domain Description: MdoB Location: 730023-731910 bp Feature: domain Description: MdoB Location: 730023-731 91 0 bp Feature: gene Location: 732492-733787 bp Ori: BBA23371.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 732717-733332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73271 7-733332 bp Feature: domain Description: GIIM Note: maturase Location: 733392-733626 bp Feature: domain Description: GIIM Note: maturase Location: 733392-733626 bp Feature: gene Location: 734093-735970 bp Ori: BBA23372.1 Feature: domain Description: Uup Location: 734096-735683 bp Feature: domain Description: Uup Location: 734096-735683 bp Feature: domain Description: ABC_tran_CTD Location: 735758-735953 bp Feature: domain Description: ABC_tran_CTD Location: 735758-735953 bp Feature: gene Location: 735982-737763 bp Ori: BBA23373.1 Gene: recQ Feature: domain Description: recQ Location: 735988-737749 bp Feature: domain Description: recQ Location: 735988-737749 bp Feature: gene Location: 1145930-1147129 bp Ori: BBA23760.1 Feature: domain Description: PRK05579 Location: 1145936-1147124 bp Feature: domain Description: PRK05579 Location: 1 1 45936-1 1 471 24 bp Feature: gene Location: 1147129-1149537 bp Ori: BBA23761.1 Gene: priA Feature: domain Description: PriA Location: 1147132-1149532 bp Feature: domain Description: PriA Location: 1 1 471 32-1 1 49532 bp Feature: gene Location: 1150174-1151469 bp Ori: BBA23762.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1150399-1151014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 50399-1 1 51 01 4 bp Feature: domain Description: GIIM Note: maturase Location: 1151074-1151308 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 51 074-1 1 51 308 bp Feature: gene Location: 1151911-1152882 bp Feature: gene Location: 1153020-1153223 bp Ori: BBA23764.1 Feature: domain Description: TM2 Location: 1153026-1153215 bp Feature: domain Description: TM2 Location: 1 1 53026-1 1 5321 5 bp Feature: gene Location: 2211034-2211732 bp Ori: BBA24759.1 Feature: domain Description: eMpr Location: 2211118-2211658 bp Feature: domain Description: eMpr Location: 221 1 1 1 8-221 1 658 bp Feature: gene Location: 2211778-2212521 bp Ori: BBA24760.1 Feature: domain Description: ADPrib_exo_Tox Location: 2211919-2212519 bp Feature: domain Description: ADPrib_exo_Tox Location: 221 1 91 9-221 251 9 bp Feature: gene Location: 2212706-2214538 bp Ori: BBA24761.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2213195-2213585 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 221 31 95-221 3585 bp Feature: gene Location: 2214603-2215418 bp Ori: BBA24762.1 Feature: domain Description: HAD_SPP Location: 2214618-2215395 bp Feature: domain Description: HAD_SPP Location: 221 461 8-221 5395 bp Feature: gene Location: 2215713-2216138 bp Ori: BBA24763.1 Feature: domain Description: MAP Location: 2215854-2216115 bp Feature: domain Description: MAP Location: 221 5854-221 61 1 5 bp Feature: gene Location: 2680158-2680850 bp Ori: BBA25209.1 Feature: domain Description: eps_fam Location: 2680227-2680836 bp Feature: domain Description: eps_fam Location: 2680227-2680836 bp Feature: gene Location: 2680867-2681529 bp Ori: BBA25210.1 Feature: domain Description: YveK Location: 2680870-2681527 bp Feature: domain Description: YveK Location: 2680870-2681 527 bp Feature: gene Location: 2682061-2683356 bp Ori: BBA25211.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2682286-2682901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2682286-2682901 bp Feature: domain Description: GIIM Note: maturase Location: 2682961-2683195 bp Feature: domain Description: GIIM Note: maturase Location: 2682961 -26831 95 bp Feature: gene Location: 2684246-2684806 bp Ori: BBA25212.1 Gene: icaR Feature: domain Description: TetR_N Location: 2684261-2684393 bp Feature: domain Description: TetR_N Location: 2684261 -2684393 bp Feature: domain Description: TetR_C_37 Location: 2684465-2684792 bp Feature: domain Description: TetR_C_37 Location: 2684465-2684792 bp Feature: gene Location: 2685096-2686208 bp Ori: BBA25213.1 Gene: icaA Feature: domain Description: PgaC_IcaA Location: 2685102-2686194 bp Feature: domain Description: PgaC_IcaA Location: 26851 02-26861 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUR1B (COG1984), MdoB (COG1368), RVT-GII, GIIM (pfam08388), Uup (COG0488), ABC_tran_CTD (pfam16326), recQ (TIGR01389), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), PriA (COG1198), TM2 (pfam05154)
eMpr (COG3591), ADPrib_exo_Tox (pfam03496), RVT-AbiK, HAD_SPP (cd02605), MAP (pfam03642), eps_fam (TIGR01007), YveK (COG3944), TetR_N (pfam00440), TetR_C_37 (pfam18665), PgaC_IcaA (TIGR03937)