myRT

myRT report for GCA_003626935.2_ASM362693v2

Download annotations/find similar RTs

Seq: CP032569.2 Pseudomonas aeruginosa strain BA7823 chromosome, complete genome (6876113 bp)
Overview 1 RT 1: 5122469-5125642 bp 2 RT 2: 5636490-5640831 bp 3 RT 3: 6147660-6154061 bp Neighborhood of RT #1 [5122469, 5125818] DUF2845 IS5 RVT-GII GIIM DUF772 Neighborhood of RT #2 [5636490, 5641007] IS5 RVT-GII GIIM DUF772 Neighborhood of RT #3 [6147660, 6154084] DUF772 RVT-GII GIIM RVT_N RVT-GII GIIM IS5 EAL Feature: gene Location: 5122469-5122780 bp Ori: QCQ89173.1 Feature: domain Description: DUF2845 Location: 5122544-5122766 bp Feature: domain Description: DUF2845 Location: 51 22544-51 22766 bp Feature: gene Location: 5122988-5123458 bp Feature: domain Description: IS5 Location: 5122994-5123432 bp Feature: domain Description: IS5 Location: 51 22994-51 23432 bp Feature: gene Location: 5123518-5124786 bp Ori: AYF71313.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5123731-5124388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 23731 -51 24388 bp Feature: domain Description: GIIM Note: maturase Location: 5124466-5124688 bp Feature: domain Description: GIIM Note: maturase Location: 51 24466-51 24688 bp Feature: gene Location: 5125175-5125270 bp Feature: gene Location: 5125306-5125818 bp Feature: domain Description: DUF772 Location: 5125456-5125642 bp Feature: domain Description: DUF772 Location: 51 25456-51 25642 bp Feature: gene Location: 5636490-5638030 bp Feature: gene Location: 5638177-5638647 bp Feature: domain Description: IS5 Location: 5638183-5638621 bp Feature: domain Description: IS5 Location: 56381 83-5638621 bp Feature: gene Location: 5638707-5639975 bp Ori: AYF71618.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5638920-5639577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5638920-5639577 bp Feature: domain Description: GIIM Note: maturase Location: 5639655-5639877 bp Feature: domain Description: GIIM Note: maturase Location: 5639655-5639877 bp Feature: gene Location: 5640364-5640459 bp Feature: gene Location: 5640495-5641007 bp Feature: domain Description: DUF772 Location: 5640645-5640831 bp Feature: domain Description: DUF772 Location: 5640645-5640831 bp Feature: gene Location: 6147660-6148172 bp Feature: domain Description: DUF772 Location: 6147810-6147996 bp Feature: domain Description: DUF772 Location: 61 4781 0-61 47996 bp Feature: gene Location: 6148208-6148303 bp Feature: gene Location: 6148692-6149960 bp Ori: AYF71888.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6148905-6149562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 48905-61 49562 bp Feature: domain Description: GIIM Note: maturase Location: 6149640-6149862 bp Feature: domain Description: GIIM Note: maturase Location: 61 49640-61 49862 bp Feature: gene Location: 6150636-6152141 bp Ori: QCQ89464.1 Gene: ltrA Feature: domain Description: RVT_N Location: 6150717-6150942 bp Feature: domain Description: RVT_N Location: 61 5071 7-61 50942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6150993-6151635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 50993-61 51 635 bp Feature: domain Description: GIIM Note: maturase Location: 6151686-6151920 bp Feature: domain Description: GIIM Note: maturase Location: 61 51 686-61 51 920 bp Feature: gene Location: 6152214-6152672 bp Feature: domain Description: IS5 Location: 6152220-6152646 bp Feature: domain Description: IS5 Location: 61 52220-61 52646 bp Feature: gene Location: 6153341-6154084 bp Ori: QCQ89465.1 Feature: domain Description: EAL Location: 6153401-6154061 bp Feature: domain Description: EAL Location: 61 53401 -61 54061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2845 (pfam11006), IS5 (COG3039), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), RVT_N (pfam13655), EAL (smart00052)