myRT

myRT report for GCA_003626955.1_ASM362695v1

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Seq: CP032614.1 Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence (492400 bp)
Overview 1 RT 1: 76-5813 bp 2 RT 2: 478781-490265 bp Neighborhood of RT #1 [76, 5813] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Neighborhood of RT #2 [478781, 490265] TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII GIIM KOG4768 RVT-GII Feature: gene Location: 76-246 bp Feature: gene Location: 242-347 bp Feature: gene Location: 351-2168 bp Ori: AYF85252.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 621-1446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 621 -1 446 bp Feature: domain Description: Intron_maturas2 Location: 1527-1818 bp Feature: domain Description: Intron_maturas2 Location: 1 527-1 81 8 bp Feature: domain Description: HNHc Note: nucleases Location: 1965-2142 bp Feature: domain Description: HNHc Note: nucleases Location: 1 965-21 42 bp Feature: gene Location: 2760-3029 bp Feature: gene Location: 3095-4885 bp Ori: AYF85254.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3392-4088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3392-4088 bp Feature: domain Description: HNHc Note: nucleases Location: 4628-4760 bp Feature: domain Description: HNHc Note: nucleases Location: 4628-4760 bp Feature: gene Location: 5567-5740 bp Feature: gene Location: 5751-5813 bp Feature: gene Location: 478781-479760 bp Feature: gene Location: 480016-481716 bp Ori: AYF85619.1 Feature: domain Description: TraG-D_C Location: 480028-480346 bp Feature: domain Description: TraG-D_C Location: 480028-480346 bp Feature: domain Description: Ftsk_gamma Location: 480706-480886 bp Feature: domain Description: Ftsk_gamma Location: 480706-480886 bp Feature: domain Description: Ftsk_gamma Location: 481039-481189 bp Feature: domain Description: Ftsk_gamma Location: 481 039-481 1 89 bp Feature: gene Location: 481948-483822 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 482248-482953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 482248-482953 bp Feature: domain Description: GIIM Note: maturase Location: 483067-483235 bp Feature: domain Description: GIIM Note: maturase Location: 483067-483235 bp Feature: gene Location: 484494-484700 bp Feature: gene Location: 484696-484800 bp Feature: gene Location: 484804-486622 bp Feature: domain Description: KOG4768 Location: 484867-485104 bp Feature: domain Description: KOG4768 Location: 484867-4851 04 bp Feature: gene Location: 487214-487483 bp Feature: gene Location: 487548-489337 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 487845-488532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 487845-488532 bp Feature: gene Location: 490019-490192 bp Feature: gene Location: 490203-490265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), GIIM (pfam08388), KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: CP032609.1 Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence (309347 bp)
Overview 1 RT 1: 55085-57548 bp 2 RT 2: 179955-184035 bp 3 RT 3: 223355-230182 bp 4 RT 4: 281434-288967 bp Neighborhood of RT #1 [55085, 57548] RVT-GII GIIM Neighborhood of RT #2 [179955, 184961] InsE RVT_N RVT-GII GIIM HNHc PDDEXK_2 HTH_11 Mga Neighborhood of RT #3 [223355, 230182] RVT_N RVT-GII GIIM HNH DEXHc_Snf DEXHc_Snf Neighborhood of RT #4 [281434, 288967] MPH2' TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII HNHc Feature: gene Location: 55085-55162 bp Feature: gene Location: 55252-55431 bp Feature: gene Location: 55605-56912 bp Ori: AYF84964.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55890-56529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55890-5652 9 bp Feature: domain Description: GIIM Note: maturase Location: 56604-56829 bp Feature: domain Description: GIIM Note: maturase Location: 56604-5682 9 bp Feature: gene Location: 57056-57454 bp Feature: gene Location: 57465-57548 bp Feature: gene Location: 179955-180207 bp Ori: AYF84872.1 Feature: domain Description: InsE Location: 179964-180204 bp Feature: domain Description: InsE Location: 179964-1802 04 bp Feature: gene Location: 179060-179955 bp Feature: gene Location: 180375-182201 bp Ori: AYF84972.1 Gene: ltrA Feature: domain Description: RVT_N Location: 180423-180666 bp Feature: domain Description: RVT_N Location: 18042 3-180666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180723-181392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18072 3-181392 bp Feature: domain Description: GIIM Note: maturase Location: 181452-181686 bp Feature: domain Description: GIIM Note: maturase Location: 181452 -181686 bp Feature: domain Description: HNHc Note: nucleases Location: 181884-182052 bp Feature: domain Description: HNHc Note: nucleases Location: 181884-182 052 bp Feature: gene Location: 182802-183098 bp Feature: domain Description: PDDEXK_2 Location: 182880-183099 bp Feature: domain Description: PDDEXK_2 Location: 182 880-183099 bp Feature: gene Location: 183543-184961 bp Ori: AYF84873.1 Feature: domain Description: HTH_11 Location: 183591-183759 bp Feature: domain Description: HTH_11 Location: 183591-183759 bp Feature: domain Description: Mga Location: 183792-184035 bp Feature: domain Description: Mga Location: 183792 -184035 bp Feature: gene Location: 223355-224074 bp Feature: gene Location: 224091-224813 bp Feature: gene Location: 224915-226726 bp Ori: AYF84905.1 Gene: ltrA Feature: domain Description: RVT_N Location: 224969-225215 bp Feature: domain Description: RVT_N Location: 2 2 4969-2 2 52 15 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225269-225923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 52 69-2 2 592 3 bp Feature: domain Description: GIIM Note: maturase Location: 225986-226220 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 5986-2 2 62 2 0 bp Feature: domain Description: HNH Note: nucleases Location: 226460-226595 bp Feature: domain Description: HNH Note: nucleases Location: 2 2 6460-2 2 6595 bp Feature: gene Location: 227298-229883 bp Ori: AYF84906.1 Feature: domain Description: DEXHc_Snf Location: 228084-228447 bp Feature: domain Description: DEXHc_Snf Location: 2 2 8084-2 2 8447 bp Feature: domain Description: DEXHc_Snf Location: 228885-229086 bp Feature: domain Description: DEXHc_Snf Location: 2 2 8885-2 2 9086 bp Feature: gene Location: 229955-230182 bp Feature: gene Location: 281434-282342 bp Ori: AYF84946.1 Gene: mph(B) Feature: domain Description: MPH2' Location: 281467-282286 bp Feature: domain Description: MPH2 ' Location: 2 81467-2 82 2 86 bp Feature: gene Location: 282463-284685 bp Feature: domain Description: TraG-D_C Location: 282802-283159 bp Feature: domain Description: TraG-D_C Location: 2 82 802 -2 83159 bp Feature: domain Description: Ftsk_gamma Location: 283567-283747 bp Feature: domain Description: Ftsk_gamma Location: 2 83567-2 83747 bp Feature: domain Description: Ftsk_gamma Location: 283879-284020 bp Feature: domain Description: Ftsk_gamma Location: 2 83879-2 8402 0 bp Feature: gene Location: 284787-286577 bp Ori: AYF84947.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285084-285780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 85084-2 85780 bp Feature: domain Description: HNHc Note: nucleases Location: 286320-286452 bp Feature: domain Description: HNHc Note: nucleases Location: 2 8632 0-2 86452 bp Feature: gene Location: 287286-288563 bp Feature: gene Location: 288581-288967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsE (COG2963), RVT_N (pfam13655), HNHc (smart00507), PDDEXK_2 (pfam12784), HTH_11 (pfam08279), Mga (pfam05043), HNH (pfam01844), DEXHc_Snf (cd17919)
MPH2' (cd05152), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)