myRT

myRT report for GCA_003641265.1_ASM364126v1

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Seq: CP032814.1 Salmonella enterica subsp. enterica strain 10TTU468x chromosome, complete genome (4985863 bp)
Overview 1 RT 1: 1103338-1106402 bp 2 RT 2: 4417876-4423705 bp Neighborhood of RT #1 [1103338, 1106402] RVT-Retrons InsE Neighborhood of RT #2 [4417876, 4423710] DUF4156 DUF2188 RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 1103338-1103547 bp Feature: gene Location: 1103613-1104454 bp Feature: gene Location: 1104504-1105463 bp Ori: AYJ67546.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1104684-1105206 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 04684-1 1 05206 bp Feature: gene Location: 1105494-1105721 bp Feature: gene Location: 1106153-1106402 bp Ori: AYJ67548.1 Feature: domain Description: InsE Location: 1106162-1106402 bp Feature: domain Description: InsE Location: 1 1 061 62-1 1 06402 bp Feature: gene Location: 4417876-4418229 bp Ori: AYJ70733.1 Feature: domain Description: DUF4156 Location: 4417945-4418221 bp Feature: domain Description: DUF41 56 Location: 441 7945-441 8221 bp Feature: gene Location: 4418584-4418814 bp Ori: AYJ71399.1 Feature: domain Description: DUF2188 Location: 4418602-4418779 bp Feature: domain Description: DUF21 88 Location: 441 8602-441 8779 bp Feature: gene Location: 4418960-4420651 bp Ori: AYJ71400.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4419041-4419275 bp Feature: domain Description: RVT_N Location: 441 9041 -441 9275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4419329-4419974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 9329-441 9974 bp Feature: domain Description: GIIM Note: maturase Location: 4420028-4420259 bp Feature: domain Description: GIIM Note: maturase Location: 4420028-4420259 bp Feature: domain Description: HNHc Note: nucleases Location: 4420469-4420625 bp Feature: domain Description: HNHc Note: nucleases Location: 4420469-4420625 bp Feature: gene Location: 4421727-4423373 bp Ori: AYJ70734.1 Feature: domain Description: groEL Location: 4421733-4423359 bp Feature: domain Description: groEL Location: 4421 733-4423359 bp Feature: gene Location: 4423417-4423710 bp Ori: AYJ70735.1 Feature: domain Description: groES Location: 4423420-4423705 bp Feature: domain Description: groES Location: 4423420-4423705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, InsE (COG2963), DUF4156 (pfam13698), DUF2188 (pfam09954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533)