myRT

myRT report for GCA_003641305.1_ASM364130v1

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Seq: CP032815.1 Salmonella enterica subsp. enterica strain 11TTU1615b chromosome, complete genome (4985867 bp)
Overview 1 RT 1: 1103332-1106395 bp 2 RT 2: 4417879-4423708 bp Neighborhood of RT #1 [1103332, 1106395] RVT-Retrons InsE Neighborhood of RT #2 [4417879, 4423713] DUF4156 DUF2188 RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 1103332-1103541 bp Feature: gene Location: 1103607-1104447 bp Feature: gene Location: 1104497-1105456 bp Ori: AYJ53359.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1104677-1105199 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 04677-1 1 051 99 bp Feature: gene Location: 1105487-1105714 bp Feature: gene Location: 1106146-1106395 bp Ori: AYJ53361.1 Feature: domain Description: InsE Location: 1106155-1106395 bp Feature: domain Description: InsE Location: 1 1 061 55-1 1 06395 bp Feature: gene Location: 4417879-4418232 bp Ori: AYJ56541.1 Feature: domain Description: DUF4156 Location: 4417948-4418224 bp Feature: domain Description: DUF41 56 Location: 441 7948-441 8224 bp Feature: gene Location: 4418587-4418817 bp Ori: AYJ57210.1 Feature: domain Description: DUF2188 Location: 4418605-4418782 bp Feature: domain Description: DUF21 88 Location: 441 8605-441 8782 bp Feature: gene Location: 4418963-4420654 bp Ori: AYJ57211.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4419044-4419278 bp Feature: domain Description: RVT_N Location: 441 9044-441 9278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4419332-4419977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 9332-441 9977 bp Feature: domain Description: GIIM Note: maturase Location: 4420031-4420262 bp Feature: domain Description: GIIM Note: maturase Location: 4420031 -4420262 bp Feature: domain Description: HNHc Note: nucleases Location: 4420472-4420628 bp Feature: domain Description: HNHc Note: nucleases Location: 4420472-4420628 bp Feature: gene Location: 4421730-4423376 bp Ori: AYJ56542.1 Feature: domain Description: groEL Location: 4421736-4423362 bp Feature: domain Description: groEL Location: 4421 736-4423362 bp Feature: gene Location: 4423420-4423713 bp Ori: AYJ56543.1 Feature: domain Description: groES Location: 4423423-4423708 bp Feature: domain Description: groES Location: 4423423-4423708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, InsE (COG2963), DUF4156 (pfam13698), DUF2188 (pfam09954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533)