myRT

myRT report for GCA_003641325.1_ASM364132v1

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Seq: CP032817.1 Salmonella enterica subsp. enterica strain 11TTU1590 chromosome, complete genome (4985874 bp)
Overview 1 RT 1: 1103332-1106396 bp 2 RT 2: 4417886-4423715 bp Neighborhood of RT #1 [1103332, 1106396] RVT-Retrons InsE Neighborhood of RT #2 [4417886, 4423720] DUF4156 DUF2188 RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 1103332-1103541 bp Feature: gene Location: 1103607-1104448 bp Feature: gene Location: 1104498-1105457 bp Ori: AYJ62644.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1104678-1105200 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 04678-1 1 05200 bp Feature: gene Location: 1105488-1105715 bp Feature: gene Location: 1106147-1106396 bp Ori: AYJ62646.1 Feature: domain Description: InsE Location: 1106156-1106396 bp Feature: domain Description: InsE Location: 1 1 061 56-1 1 06396 bp Feature: gene Location: 4417886-4418239 bp Ori: AYJ65828.1 Feature: domain Description: DUF4156 Location: 4417955-4418231 bp Feature: domain Description: DUF41 56 Location: 441 7955-441 8231 bp Feature: gene Location: 4418594-4418824 bp Ori: AYJ66496.1 Feature: domain Description: DUF2188 Location: 4418612-4418789 bp Feature: domain Description: DUF21 88 Location: 441 861 2-441 8789 bp Feature: gene Location: 4418970-4420661 bp Ori: AYJ66497.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4419051-4419285 bp Feature: domain Description: RVT_N Location: 441 9051 -441 9285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4419339-4419984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 9339-441 9984 bp Feature: domain Description: GIIM Note: maturase Location: 4420038-4420269 bp Feature: domain Description: GIIM Note: maturase Location: 4420038-4420269 bp Feature: domain Description: HNHc Note: nucleases Location: 4420479-4420635 bp Feature: domain Description: HNHc Note: nucleases Location: 4420479-4420635 bp Feature: gene Location: 4421737-4423383 bp Ori: AYJ65829.1 Feature: domain Description: groEL Location: 4421743-4423369 bp Feature: domain Description: groEL Location: 4421 743-4423369 bp Feature: gene Location: 4423427-4423720 bp Ori: AYJ65830.1 Feature: domain Description: groES Location: 4423430-4423715 bp Feature: domain Description: groES Location: 4423430-442371 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, InsE (COG2963), DUF4156 (pfam13698), DUF2188 (pfam09954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533)