myRT

myRT report for GCA_003660205.1_ASM366020v1

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Seq: CP032833.1 Klebsiella pneumoniae strain INF237 chromosome, complete genome (5203185 bp)
Overview 1 RT 1: 483542-489526 bp 2 RT 2: 1257654-1262846 bp 3 RT 3: 1548305-1553114 bp 4 RT 4: 1680810-1683155 bp 5 RT 5: 2808897-2813795 bp 6 RT 6: 3051463-3055640 bp 7 RT 7: 3143991-3148333 bp Neighborhood of RT #1 [483542, 489564] TraG_N RVT-GII InsA RVT-GII DDE_Tnp_1_5 metallo_McbB Neighborhood of RT #2 [1257654, 1262896] IclR RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #3 [1548305, 1553128] zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII PRK10016 YccC Neighborhood of RT #4 [1680810, 1684069] HTH_XRE RVT-Retrons MobA_MobL Neighborhood of RT #5 [2808897, 2813833] PRK10598 PRK05451 RVT-GII zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 Neighborhood of RT #6 [3051463, 3055678] RVT-GII zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 Neighborhood of RT #7 [3143991, 3148333] UvrB RVT-GII Feature: gene Location: 483542-483913 bp Feature: gene Location: 483910-485436 bp Ori: AYJ92251.1 Feature: domain Description: TraG_N Location: 483934-485362 bp Feature: domain Description: TraG_N Location: 483934-485362 bp Feature: gene Location: 485456-485620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485459-485618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485459-48561 8 bp Feature: gene Location: 485636-486333 bp Feature: domain Description: InsA Location: 485642-485906 bp Feature: domain Description: InsA Location: 485642-485906 bp Feature: gene Location: 486391-487203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 486394-486841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 486394-486841 bp Feature: gene Location: 487671-488159 bp Feature: domain Description: DDE_Tnp_1_5 Location: 487731-488061 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 487731 -488061 bp Feature: gene Location: 488677-489564 bp Ori: AYJ92252.1 Feature: domain Description: metallo_McbB Location: 488707-489526 bp Feature: domain Description: metallo_McbB Location: 488707-489526 bp Feature: gene Location: 1257654-1258439 bp Ori: AYJ92959.1 Feature: domain Description: IclR Location: 1257681-1258407 bp Feature: domain Description: IclR Location: 1 257681 -1 258407 bp Feature: gene Location: 1258601-1258834 bp Feature: gene Location: 1258967-1260451 bp Ori: AYJ92960.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1259369-1260059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 259369-1 260059 bp Feature: gene Location: 1260509-1261564 bp Feature: domain Description: PRK15440 Location: 1260515-1261562 bp Feature: domain Description: PRK1 5440 Location: 1 26051 5-1 261 562 bp Feature: gene Location: 1261607-1262896 bp Ori: AYJ92961.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 1261649-1262846 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1 261 649-1 262846 bp Feature: gene Location: 1548305-1549525 bp Ori: AYJ93155.1 Feature: domain Description: zf-ISL3 Location: 1548437-1548563 bp Feature: domain Description: zf-ISL3 Location: 1 548437-1 548563 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1548581-1548728 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1 548581 -1 548728 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1548776-1549487 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1 548776-1 549487 bp Feature: gene Location: 1549560-1549799 bp Feature: gene Location: 1549932-1551416 bp Ori: AYJ93156.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1550334-1551024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 550334-1 551 024 bp Feature: gene Location: 1551498-1551971 bp Ori: AYJ93157.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1551501-1551960 bp Feature: domain Description: PRK1 001 6 Location: 1 551 501 -1 551 960 bp Feature: gene Location: 1552070-1553128 bp Ori: AYJ93158.1 Feature: domain Description: YccC Location: 1552076-1553114 bp Feature: domain Description: YccC Location: 1 552076-1 5531 1 4 bp Feature: gene Location: 1680810-1681025 bp Feature: gene Location: 1681116-1681397 bp Ori: AYJ93268.1 Feature: domain Description: HTH_XRE Location: 1681131-1681296 bp Feature: domain Description: HTH_XRE Location: 1 681 1 31 -1 681 296 bp Feature: gene Location: 1681390-1682490 bp Ori: AYJ93269.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1681531-1682083 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 681 531 -1 682083 bp Feature: gene Location: 1682567-1684069 bp Ori: AYJ93270.1 Feature: domain Description: MobA_MobL Location: 1682618-1683155 bp Feature: domain Description: MobA_MobL Location: 1 68261 8-1 6831 55 bp Feature: gene Location: 2808897-2809457 bp Ori: AYJ94265.1 Feature: domain Description: PRK10598 Location: 2808900-2809455 bp Feature: domain Description: PRK1 0598 Location: 2808900-2809455 bp Feature: gene Location: 2809583-2810629 bp Ori: AYJ94266.1 Feature: domain Description: PRK05451 Location: 2809598-2810624 bp Feature: domain Description: PRK05451 Location: 2809598-281 0624 bp Feature: gene Location: 2810722-2812206 bp Ori: AYJ94267.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2811124-2811814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281 1 1 24-281 1 81 4 bp Feature: gene Location: 2812339-2812578 bp Feature: gene Location: 2812613-2813833 bp Ori: AYJ94268.1 Feature: domain Description: zf-ISL3 Location: 2812745-2812871 bp Feature: domain Description: zf-ISL3 Location: 281 2745-281 2871 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 2812889-2813036 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 281 2889-281 3036 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2813084-2813795 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 281 3084-281 3795 bp Feature: gene Location: 3051463-3051786 bp Feature: gene Location: 3052250-3052438 bp Feature: gene Location: 3052527-3054011 bp Ori: AYJ94455.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3052929-3053619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3052929-305361 9 bp Feature: gene Location: 3054144-3054383 bp Feature: gene Location: 3054458-3055678 bp Ori: AYJ94456.1 Feature: domain Description: zf-ISL3 Location: 3054590-3054716 bp Feature: domain Description: zf-ISL3 Location: 3054590-305471 6 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3054734-3054881 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3054734-3054881 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3054929-3055640 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3054929-3055640 bp Feature: gene Location: 3143991-3146012 bp Ori: AYJ94531.1 Gene: uvrB Feature: domain Description: UvrB Location: 3143997-3145998 bp Feature: domain Description: UvrB Location: 31 43997-31 45998 bp Feature: gene Location: 3146101-3146340 bp Feature: gene Location: 3146473-3147957 bp Ori: AYJ94532.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3146875-3147565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 46875-31 47565 bp Feature: gene Location: 3147903-3148091 bp Feature: gene Location: 3148154-3148333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG_N (pfam07916), RVT-GII, InsA (COG3677), DDE_Tnp_1_5 (pfam13737), metallo_McbB (TIGR04424), IclR (pfam01614), PRK15440 (L-rhamnonate dehydratase; Provisional), MFS_ExuT_GudP_like (cd17319), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542)
DDE_Tnp_ISL3 (pfam01610), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), HTH_XRE (smart00530), RVT-Retrons, MobA_MobL (pfam03389), PRK10598 (lipoprotein; Provisional), PRK05451 (dihydroorotase; Provisional), UvrB (pfam12344)

Seq: CP032835.1 Klebsiella pneumoniae strain INF237 plasmid pINF237_02, complete sequence (93621 bp)
Overview 1 RT 1: 22546-27432 bp Neighborhood of RT #1 [22546, 27470] umuC PRK10276 RVT-GII zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 Feature: gene Location: 22546-23817 bp Ori: AYJ96674.1 Gene: umuC Feature: domain Description: umuC Location: 22549-23812 bp Feature: domain Description: umuC Location: 2 2 549-2 3812 bp Feature: gene Location: 23817-24242 bp Ori: AYJ96675.1 Feature: domain Description: PRK10276 Location: 23826-24228 bp Feature: domain Description: PRK102 76 Location: 2 382 6-2 42 2 8 bp Feature: gene Location: 24319-25803 bp Ori: AYJ96676.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24721-25411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 472 1-2 5411 bp Feature: gene Location: 25936-26175 bp Feature: gene Location: 26250-27470 bp Ori: AYJ96677.1 Feature: domain Description: zf-ISL3 Location: 26382-26508 bp Feature: domain Description: zf-ISL3 Location: 2 6382 -2 6508 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 26526-26673 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 2 652 6-2 6673 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 26721-27432 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2 672 1-2 7432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)

Seq: CP032837.1 Klebsiella pneumoniae strain INF237 plasmid pINF237_04, complete sequence (44993 bp)
Overview 1 RT 1: 26002-31159 bp Neighborhood of RT #1 [26002, 31173] zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII Cloacin E2R135 Cytotoxic Cloacin_immun Feature: gene Location: 26002-27222 bp Ori: AYJ96863.1 Feature: domain Description: zf-ISL3 Location: 26134-26260 bp Feature: domain Description: zf-ISL3 Location: 2613 4-26260 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 26278-26425 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 26278-26425 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 26473-27184 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 26473 -27184 bp Feature: gene Location: 27257-27496 bp Feature: gene Location: 27629-29113 bp Ori: AYJ96864.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28031-28721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2803 1-28721 bp Feature: gene Location: 29218-30906 bp Ori: AYJ96865.1 Feature: domain Description: Cloacin Location: 29347-30175 bp Feature: domain Description: Cloacin Location: 293 47-3 0175 bp Feature: domain Description: E2R135 Location: 30184-30589 bp Feature: domain Description: E2R13 5 Location: 3 0184-3 0589 bp Feature: domain Description: Cytotoxic Location: 30643-30895 bp Feature: domain Description: Cytotoxic Location: 3 0643 -3 0895 bp Feature: gene Location: 30916-31173 bp Ori: AYJ96866.1 Feature: domain Description: Cloacin_immun Location: 30922-31159 bp Feature: domain Description: Cloacin_immun Location: 3 0922-3 1159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT-GII, Cloacin (pfam03515), E2R135 (pfam11570), Cytotoxic (pfam09000), Cloacin_immun (pfam03513)