myRT

myRT report for GCA_003665215.1_ASM366521v1

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Seq: CP032855.1 Bacillus subtilis subsp. subtilis strain PJ-7 chromosome, complete genome (4293706 bp)
Overview 1 RT 1: 13165-22452 bp 2 RT 2: 3135975-3141729 bp Neighborhood of RT #1 [13165, 22517] PRK03103 RVT-GII Intron_maturas2 HNHc PolY_Pol_V_umuC YolD RVT_N RVT-GII GIIM HNH RimL SUKH_6 Neighborhood of RT #2 [3135975, 3141811] HTH_MerR-like_sg4 PRK06836 RVT_N RVT-GII GIIM HNH PRK06836 TlyC Feature: gene Location: 13165-13341 bp Feature: gene Location: 13383-13997 bp Ori: AYK64083.1 Feature: domain Description: PRK03103 Location: 13446-13989 bp Feature: domain Description: PRK031 03 Location: 1 3446-1 3989 bp Feature: gene Location: 14038-15849 bp Ori: AYK64084.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14302-15133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4302-1 51 33 bp Feature: domain Description: Intron_maturas2 Location: 15208-15616 bp Feature: domain Description: Intron_maturas2 Location: 1 5208-1 561 6 bp Feature: domain Description: HNHc Note: nucleases Location: 15661-15823 bp Feature: domain Description: HNHc Note: nucleases Location: 1 5661 -1 5823 bp Feature: gene Location: 16413-17111 bp Feature: domain Description: PolY_Pol_V_umuC Location: 16452-17112 bp Feature: domain Description: PolY_Pol_V_umuC Location: 1 6452-1 71 1 2 bp Feature: gene Location: 17104-17436 bp Ori: AYK64085.1 Feature: domain Description: YolD Location: 17146-17422 bp Feature: domain Description: YolD Location: 1 71 46-1 7422 bp Feature: gene Location: 17989-18348 bp Feature: gene Location: 18609-18725 bp Feature: gene Location: 18802-20505 bp Ori: AYK64089.1 Gene: ltrA Feature: domain Description: RVT_N Location: 18859-19102 bp Feature: domain Description: RVT_N Location: 1 8859-1 91 02 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19159-19798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 59-1 9798 bp Feature: domain Description: GIIM Note: maturase Location: 19873-20107 bp Feature: domain Description: GIIM Note: maturase Location: 1 9873-201 07 bp Feature: domain Description: HNH Note: nucleases Location: 20347-20482 bp Feature: domain Description: HNH Note: nucleases Location: 20347-20482 bp Feature: gene Location: 21370-21903 bp Ori: AYK64090.1 Feature: domain Description: RimL Location: 21397-21895 bp Feature: domain Description: RimL Location: 21 397-21 895 bp Feature: gene Location: 21963-22517 bp Ori: AYK64091.1 Feature: domain Description: SUKH_6 Location: 22044-22452 bp Feature: domain Description: SUKH_6 Location: 22044-22452 bp Feature: gene Location: 3135975-3136406 bp Ori: AYK66908.1 Feature: domain Description: HTH_MerR-like_sg4 Location: 3136011-3136401 bp Feature: domain Description: HTH_MerR-like_sg4 Location: 31 3601 1 -31 36401 bp Feature: gene Location: 3136562-3137554 bp Feature: domain Description: PRK06836 Location: 3136580-3137555 bp Feature: domain Description: PRK06836 Location: 31 36580-31 37555 bp Feature: gene Location: 3138123-3139826 bp Ori: AYK66909.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3138180-3138423 bp Feature: domain Description: RVT_N Location: 31 381 80-31 38423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3138480-3139119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 38480-31 391 1 9 bp Feature: domain Description: GIIM Note: maturase Location: 3139194-3139428 bp Feature: domain Description: GIIM Note: maturase Location: 31 391 94-31 39428 bp Feature: domain Description: HNH Note: nucleases Location: 3139668-3139803 bp Feature: domain Description: HNH Note: nucleases Location: 31 39668-31 39803 bp Feature: gene Location: 3139912-3140100 bp Feature: domain Description: PRK06836 Location: 3139915-3140095 bp Feature: domain Description: PRK06836 Location: 31 3991 5-31 40095 bp Feature: gene Location: 3140427-3141811 bp Feature: domain Description: TlyC Location: 3140433-3141729 bp Feature: domain Description: TlyC Location: 31 40433-31 41 729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03103 (DNA polymerase IV; Reviewed), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PolY_Pol_V_umuC (cd01700), YolD (pfam08863), RVT_N (pfam13655), GIIM (pfam08388), HNH (pfam01844), RimL (COG1670)
SUKH_6 (pfam14568), HTH_MerR-like_sg4 (cd04779), PRK06836 (pyridoxal phosphate-dependent aminotransferase), TlyC (COG1253)