myRT

myRT report for GCA_003665375.1_ASM366537v1

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Seq: CP032897.1 Enterobacter kobei strain WCHEK045523 chromosome, complete genome (4953590 bp)
Overview 1 RT 1: 1242406-1247995 bp 2 RT 2: 1256549-1262024 bp 3 RT 3: 2154707-2158515 bp 4 RT 4: 4358063-4363584 bp Neighborhood of RT #1 [1242406, 1248520] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C COG3436 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C COG3547 Neighborhood of RT #2 [1256549, 1262023] scrB_fam fruct_sucro_rep RVT-GII GIIM PHA02517 Neighborhood of RT #3 [2154707, 2158842] SUKH_6 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #4 [4358063, 4363673] InsE RVT-GII GIIM PHA02517 UvrD UvrD Feature: gene Location: 1242406-1243989 bp Ori: AYL04609.1 Feature: domain Description: LZ_Tnp_IS66 Location: 1242565-1242775 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 242565-1 242775 bp Feature: domain Description: zf-IS66 Location: 1242802-1242931 bp Feature: domain Description: zf-IS66 Location: 1 242802-1 242931 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1242976-1243834 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 242976-1 243834 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1243858-1243966 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 243858-1 243966 bp Feature: gene Location: 1244046-1244792 bp Feature: domain Description: COG3436 Location: 1244322-1244790 bp Feature: domain Description: COG3436 Location: 1 244322-1 244790 bp Feature: gene Location: 1245314-1246558 bp Ori: AYL04610.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1245527-1246184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 245527-1 2461 84 bp Feature: domain Description: GIIM Note: maturase Location: 1246265-1246484 bp Feature: domain Description: GIIM Note: maturase Location: 1 246265-1 246484 bp Feature: gene Location: 1246650-1247441 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1246653-1247286 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 246653-1 247286 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1247307-1247418 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 247307-1 24741 8 bp Feature: gene Location: 1247500-1248520 bp Feature: domain Description: COG3547 Location: 1247518-1247995 bp Feature: domain Description: COG3547 Location: 1 24751 8-1 247995 bp Feature: gene Location: 1256549-1257949 bp Ori: AYL04615.1 Feature: domain Description: scrB_fam Location: 1256594-1257866 bp Feature: domain Description: scrB_fam Location: 1 256594-1 257866 bp Feature: gene Location: 1257979-1258983 bp Ori: AYL04616.1 Feature: domain Description: fruct_sucro_rep Location: 1258000-1258978 bp Feature: domain Description: fruct_sucro_rep Location: 1 258000-1 258978 bp Feature: gene Location: 1259417-1260940 bp Ori: AYL04617.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1259690-1260422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 259690-1 260422 bp Feature: domain Description: GIIM Note: maturase Location: 1260497-1260719 bp Feature: domain Description: GIIM Note: maturase Location: 1 260497-1 26071 9 bp Feature: gene Location: 1261234-1261596 bp Feature: gene Location: 1261598-1262023 bp Feature: domain Description: PHA02517 Location: 1261688-1262024 bp Feature: domain Description: PHA0251 7 Location: 1 261 688-1 262024 bp Feature: gene Location: 2154707-2155240 bp Ori: AYL05427.1 Feature: domain Description: SUKH_6 Location: 2154818-2155145 bp Feature: domain Description: SUKH_6 Location: 21 5481 8-21 551 45 bp Feature: gene Location: 2155507-2155983 bp Feature: domain Description: PHA02517 Location: 2155510-2155975 bp Feature: domain Description: PHA0251 7 Location: 21 5551 0-21 55975 bp Feature: gene Location: 2156064-2157587 bp Ori: AYL05428.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2156337-2157069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 56337-21 57069 bp Feature: domain Description: GIIM Note: maturase Location: 2157144-2157342 bp Feature: domain Description: GIIM Note: maturase Location: 21 571 44-21 57342 bp Feature: gene Location: 2157881-2158291 bp Feature: gene Location: 2158245-2158842 bp Feature: domain Description: InsE Location: 2158257-2158515 bp Feature: domain Description: InsE Location: 21 58257-21 5851 5 bp Feature: gene Location: 4358063-4358748 bp Feature: domain Description: InsE Location: 4358078-4358339 bp Feature: domain Description: InsE Location: 4358078-4358339 bp Feature: gene Location: 4358702-4359112 bp Feature: gene Location: 4359406-4360929 bp Ori: AYL07378.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4359679-4360411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4359679-436041 1 bp Feature: domain Description: GIIM Note: maturase Location: 4360486-4360684 bp Feature: domain Description: GIIM Note: maturase Location: 4360486-4360684 bp Feature: gene Location: 4361010-4361486 bp Feature: domain Description: PHA02517 Location: 4361013-4361478 bp Feature: domain Description: PHA0251 7 Location: 4361 01 3-4361 478 bp Feature: gene Location: 4361808-4363673 bp Ori: AYL07379.1 Feature: domain Description: UvrD Location: 4361874-4362117 bp Feature: domain Description: UvrD Location: 4361 874-43621 1 7 bp Feature: domain Description: UvrD Location: 4362411-4363584 bp Feature: domain Description: UvrD Location: 436241 1 -4363584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), COG3436 (Transposase ), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), scrB_fam (TIGR01322), fruct_sucro_rep (TIGR02417)
PHA02517 (putative transposase OrfB; Reviewed), SUKH_6 (pfam14568), InsE (COG2963), UvrD (COG0210)

Seq: CP032893.1 Enterobacter kobei strain WCHEK045523 plasmid p1_045523, complete sequence (156442 bp)
Overview 1 RT 1: 89573-95513 bp Neighborhood of RT #1 [89573, 95513] PinE RVT-GII GIIM SapB Feature: gene Location: 89573-90124 bp Ori: AYL03361.1 Feature: domain Description: PinE Location: 89576-90119 bp Feature: domain Description: PinE Location: 89576-90119 bp Feature: gene Location: 90140-92236 bp Feature: gene Location: 92351-93559 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92633-93251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 633-932 51 bp Feature: domain Description: GIIM Note: maturase Location: 93299-93503 bp Feature: domain Description: GIIM Note: maturase Location: 932 99-93503 bp Feature: gene Location: 94313-94801 bp Ori: AYL03363.1 Feature: domain Description: SapB Location: 94376-94790 bp Feature: domain Description: SapB Location: 94376-94790 bp Feature: gene Location: 95325-95513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), SapB (smart00741)