myRT

myRT report for GCA_003668775.1_ASM366877v1

Download annotations/find similar RTs

Seq: CP033055.1 Serratia sp. 3ACOL1 chromosome, complete genome (5876609 bp)
Overview 1 RT 1: 3653432-3658202 bp 2 RT 2: 4209312-4215027 bp 3 RT 3: 4715991-4720112 bp Neighborhood of RT #1 [3653432, 3658204] Colicin Colicin_im RVT-GII GIIM PRK11267 PRK10414 Neighborhood of RT #2 [4209312, 4215029] PBP2_DppA_like HTH_LUXR RVT-UG4 FimA PRK15287 Neighborhood of RT #3 [4715991, 4720267] PRK15287 FimA RVT-UG4 PRK15302 Feature: gene Location: 3653432-3654067 bp Ori: AYM92023.1 Feature: domain Description: Colicin Location: 3653492-3654044 bp Feature: domain Description: Colicin Location: 3653492-3654044 bp Feature: gene Location: 3654085-3654609 bp Ori: AYM92024.1 Feature: domain Description: Colicin_im Location: 3654235-3654565 bp Feature: domain Description: Colicin_im Location: 3654235-3654565 bp Feature: gene Location: 3654889-3656277 bp Ori: AYM92025.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3655219-3655837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365521 9-3655837 bp Feature: domain Description: GIIM Note: maturase Location: 3655888-3656104 bp Feature: domain Description: GIIM Note: maturase Location: 3655888-36561 04 bp Feature: gene Location: 3656786-3657208 bp Ori: AYM92026.1 Gene: exbD Feature: domain Description: PRK11267 Location: 3656789-3657203 bp Feature: domain Description: PRK1 1 267 Location: 3656789-3657203 bp Feature: gene Location: 3657212-3658204 bp Ori: AYM92027.1 Gene: exbB Feature: domain Description: PRK10414 Location: 3657494-3658202 bp Feature: domain Description: PRK1 041 4 Location: 3657494-3658202 bp Feature: gene Location: 4209312-4210919 bp Ori: AYM92489.1 Feature: domain Description: PBP2_DppA_like Location: 4209402-4210869 bp Feature: domain Description: PBP2_DppA_like Location: 4209402-421 0869 bp Feature: gene Location: 4211489-4212091 bp Ori: AYM92490.1 Feature: domain Description: HTH_LUXR Location: 4211885-4212047 bp Feature: domain Description: HTH_LUXR Location: 421 1 885-421 2047 bp Feature: gene Location: 4213413-4213850 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4213422-4213740 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 421 3422-421 3740 bp Feature: gene Location: 4213943-4214518 bp Ori: AYM92491.1 Feature: domain Description: FimA Location: 4214009-4214516 bp Feature: domain Description: FimA Location: 421 4009-421 451 6 bp Feature: gene Location: 4214529-4215029 bp Ori: AYM92492.1 Feature: domain Description: PRK15287 Location: 4214571-4215027 bp Feature: domain Description: PRK1 5287 Location: 421 4571 -421 5027 bp Feature: gene Location: 4715991-4716476 bp Ori: AYM94059.1 Feature: domain Description: PRK15287 Location: 4716042-4716474 bp Feature: domain Description: PRK1 5287 Location: 471 6042-471 6474 bp Feature: gene Location: 4716473-4717006 bp Ori: AYM92886.1 Feature: domain Description: FimA Location: 4716491-4717004 bp Feature: domain Description: FimA Location: 471 6491 -471 7004 bp Feature: gene Location: 4716999-4717964 bp Ori: AYM92887.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4717341-4717785 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 471 7341 -471 7785 bp Feature: gene Location: 4718345-4718794 bp Feature: gene Location: 4719644-4720267 bp Ori: AYM92889.1 Feature: domain Description: PRK15302 Location: 4719650-4720112 bp Feature: domain Description: PRK1 5302 Location: 471 9650-47201 1 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Colicin (pfam01024), Colicin_im (pfam03857), RVT-GII, GIIM (pfam08388), PRK11267 (biopolymer transport protein ExbD; Provisional), PRK10414 (biopolymer transporter ExbB), PBP2_DppA_like (cd08493), HTH_LUXR (smart00421), RVT-UG4, FimA (pfam16970)
PRK15287 (fimbrial minor subunit StfF), PRK15302 (hypothetical protein; Provisional)