myRT

myRT report for GCA_003671975.1_ASM367197v1

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Seq: CP022562.1 Pseudomonas monteilii strain B5 chromosome, complete genome (5948598 bp)
Overview 1 RT 1: 3695700-3700640 bp 2 RT 2: 4721854-4726238 bp 3 RT 3: 5004196-5009274 bp Neighborhood of RT #1 [3695700, 3700657] HTH_Tnp_1 RVT-GII InsE SsuA_fam Neighborhood of RT #2 [4721854, 4726238] SLATT_5 RVT-UG17 Neighborhood of RT #3 [5004196, 5009274] MMSDH LysR RVT-Retrons CSP_CDS Feature: gene Location: 3695700-3695934 bp Ori: AYN16817.1 Feature: domain Description: HTH_Tnp_1 Location: 3695709-3695910 bp Feature: domain Description: HTH_Tnp_1 Location: 3695709-369591 0 bp Feature: gene Location: 3695934-3696850 bp Feature: gene Location: 3697857-3699653 bp Ori: AYN16818.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3698571-3699261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3698571 -3699261 bp Feature: gene Location: 3699809-3700054 bp Ori: AYN16819.1 Feature: domain Description: InsE Location: 3699815-3700022 bp Feature: domain Description: InsE Location: 369981 5-3700022 bp Feature: gene Location: 3700220-3700657 bp Ori: AYN16820.1 Feature: domain Description: SsuA_fam Location: 3700226-3700640 bp Feature: domain Description: SsuA_fam Location: 3700226-3700640 bp Feature: gene Location: 4721854-4722489 bp Feature: gene Location: 4722682-4723245 bp Ori: AYN17709.1 Feature: domain Description: SLATT_5 Location: 4722691-4723213 bp Feature: domain Description: SLATT_5 Location: 4722691 -472321 3 bp Feature: gene Location: 4723242-4724606 bp Ori: AYN17710.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4723470-4724073 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 4723470-4724073 bp Feature: gene Location: 4724896-4725795 bp Feature: gene Location: 4725795-4726238 bp Feature: gene Location: 5004196-5005722 bp Ori: AYN17966.1 Gene: mmsA Feature: domain Description: MMSDH Location: 5004241-5005669 bp Feature: domain Description: MMSDH Location: 5004241 -5005669 bp Feature: gene Location: 5005855-5006799 bp Ori: AYN18896.1 Feature: domain Description: LysR Location: 5005891-5006743 bp Feature: domain Description: LysR Location: 5005891 -5006743 bp Feature: gene Location: 5007512-5008693 bp Ori: AYN17967.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5007650-5008223 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5007650-5008223 bp Feature: gene Location: 5008697-5008915 bp Ori: AYN17968.1 Feature: domain Description: CSP_CDS Location: 5008721-5008898 bp Feature: domain Description: CSP_CDS Location: 5008721 -5008898 bp Feature: gene Location: 5009071-5009274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII, InsE (COG2963), SsuA_fam (TIGR01728), SLATT_5 (pfam18160), RVT-UG17, MMSDH (TIGR01722), LysR (COG0583), RVT-Retrons, CSP_CDS (cd04458)