myRT

myRT report for GCA_003691445.1_ASM369144v1

Download annotations/find similar RTs

Seq: CP033104.1 Pseudomonas sp. LTGT-11-2Z chromosome, complete genome (6073276 bp)
Overview 1 RT 1: 1067234-1072259 bp 2 RT 2: 1350270-1354654 bp 3 RT 3: 2472061-2479397 bp Neighborhood of RT #1 [1067234, 1072312] CSP_CDS RVT-Retrons LysR MMSDH Neighborhood of RT #2 [1350270, 1354654] RVT-UG17 SLATT_5 Neighborhood of RT #3 [2472061, 2479411] SsuA_fam InsE RVT-GII IS5 LysR Feature: gene Location: 1067234-1067437 bp Feature: gene Location: 1067593-1067811 bp Ori: AYN98320.1 Feature: domain Description: CSP_CDS Location: 1067617-1067794 bp Feature: domain Description: CSP_CDS Location: 1 06761 7-1 067794 bp Feature: gene Location: 1067815-1068996 bp Ori: AYN98321.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1067953-1068526 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 067953-1 068526 bp Feature: gene Location: 1069709-1070653 bp Ori: AYO02711.1 Feature: domain Description: LysR Location: 1069745-1070597 bp Feature: domain Description: LysR Location: 1 069745-1 070597 bp Feature: gene Location: 1070786-1072312 bp Ori: AYN98322.1 Gene: mmsA Feature: domain Description: MMSDH Location: 1070831-1072259 bp Feature: domain Description: MMSDH Location: 1 070831 -1 072259 bp Feature: gene Location: 1350270-1350713 bp Feature: gene Location: 1350713-1351627 bp Feature: gene Location: 1351902-1353266 bp Ori: AYN98582.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1352130-1352733 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 3521 30-1 352733 bp Feature: gene Location: 1353263-1353826 bp Ori: AYN98583.1 Feature: domain Description: SLATT_5 Location: 1353272-1353794 bp Feature: domain Description: SLATT_5 Location: 1 353272-1 353794 bp Feature: gene Location: 1354019-1354654 bp Feature: gene Location: 2472061-2472498 bp Ori: AYN99559.1 Feature: domain Description: SsuA_fam Location: 2472067-2472481 bp Feature: domain Description: SsuA_fam Location: 2472067-2472481 bp Feature: gene Location: 2472664-2472909 bp Ori: AYN99560.1 Feature: domain Description: InsE Location: 2472670-2472877 bp Feature: domain Description: InsE Location: 2472670-2472877 bp Feature: gene Location: 2473065-2474861 bp Ori: AYN99561.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2473779-2474469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2473779-2474469 bp Feature: gene Location: 2475903-2476883 bp Ori: AYN99562.1 Feature: domain Description: IS5 Location: 2476089-2476857 bp Feature: domain Description: IS5 Location: 2476089-2476857 bp Feature: gene Location: 2478530-2479411 bp Ori: AYN99563.1 Feature: domain Description: LysR Location: 2478533-2479397 bp Feature: domain Description: LysR Location: 2478533-2479397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CSP_CDS (cd04458), RVT-Retrons, LysR (COG0583), MMSDH (TIGR01722), RVT-UG17, SLATT_5 (pfam18160), SsuA_fam (TIGR01728), InsE (COG2963), RVT-GII, IS5 (COG3039)